Amborella trichopoda: 18447906
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Entry
18447906 CDS
T02990
Name
(RefSeq) tryptophan synthase beta chain 1
KO
K01696
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
atr
Amborella trichopoda
Pathway
atr00260
Glycine, serine and threonine metabolism
atr00400
Phenylalanine, tyrosine and tryptophan biosynthesis
atr01100
Metabolic pathways
atr01110
Biosynthesis of secondary metabolites
atr01230
Biosynthesis of amino acids
Module
atr_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
18447906
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
18447906
Enzymes [BR:
atr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
18447906
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Paralog
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Motif
Pfam:
PALP
Motif
Other DBs
NCBI-GeneID:
18447906
NCBI-ProteinID:
XP_006858053
UniProt:
U5DBG0
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All DBs
Position
Unknown
AA seq
464 aa
AA seq
DB search
MAMYSASCSSNGLHFAINSRSSSFNGVLIPTNPSNLAFSSTVTPSGSVICRIAENPTLEM
EVSPVIQRPDSFGRFGKFGGKYVPETLMHALTELESAFAKFVKEKEFKDELNGILKDFVG
RPCPLYFAERLSEHYKRPNGEGPHIYLKREDLNHTGAHKINNAVAQVLLAKRLGKKRIIA
ETGAGQHGVATATACARFGLQCIVYMGAQDMERQSLNVFRMRLLGAEVRGVHAGTATLKD
ATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVREFHAVIGEETRKQALEKWGGKPDVLV
ACVGGGSNAMGLFHEFIDDKDVRLIGVEAAGFGLDSGKHAATLTKGEVGVLHGAMSYLLQ
DEDGQIVEPHSISAGLDYPGVGPEHSFLKDIGRAEYYSITDQEALDAFKRLSRLEGIIPA
LETSHALAYLEKLCPTLPDATKVVLNCSGRGDKDVMTAIKLLEV
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggccatgtactcagcttcttgttctagtaatggccttcactttgctataaattccaga
agttcctccttcaatggtgtcctgattcccacaaatcctagcaatttggcctttagctcc
actgtgacgccttctggttctgttatatgtagaatcgctgaaaacccaactctagaaatg
gaggtttccccagttatacagaggcctgattcatttggacggtttggaaaatttggggga
aaatatgttcctgaaaccctaatgcatgctctcactgagctggagtcggcttttgcaaaa
tttgtcaaagagaaggaatttaaggatgaactaaatgggattttgaaagactttgttggc
cgcccgtgccccctatactttgcggagcgactctcagagcactataagcgtcccaatggt
gaggggccccacatatacctgaagagggaagatctcaaccacactggggcccacaagatc
aacaacgcggttgctcaagtgttactcgcaaagcgcctgggtaagaagcgcataattgct
gagactggtgctggtcagcatggagttgcaaccgccactgcatgtgcgaggtttggtttg
caatgcattgtatacatgggggctcaagacatggagagacagtctctaaatgtgtttaga
atgcgtctccttggagctgaggtaagaggtgtccatgctggtactgcaacactgaaggat
gccacatcggaggctatccgagactgggtaacaaatgtagagaccacacattacattctc
ggttctgttgcagggccacatccgtatccaatgatggtaagagagtttcatgcagtcatt
ggtgaagaaaccaggaaacaggctttggagaaatggggtggaaagccagatgtattagtg
gcctgtgttggtggtggttcgaatgcaatgggactctttcatgagttcattgatgacaaa
gatgtaaggttgattggtgtggaggctgctgggtttggcctagatagtggtaagcatgct
gcgacattgactaagggggaggtaggtgttcttcatggggctatgagttacttgttgcag
gatgaggatgggcaaattgttgagccacactcaattagtgctgggttggattaccctggg
gttggacctgaacatagctttttgaaggacattggccgtgctgagtactatagcattact
gatcaggaggcactggatgctttcaagaggttatctagattagaaggcattatccctgcc
cttgagacctcccatgctttggcatatttggagaagctttgcccaactttacccgatgca
acaaaggttgttctcaactgtagtggccgtggagataaggatgttatgaccgcaattaaa
cttttggaggtctag
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