Amborella trichopoda: 18448433
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Entry
18448433 CDS
T02990
Name
(RefSeq) uncharacterized protein LOC18448433 isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
atr03016
]
18448433
Enzymes [BR:
atr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
18448433
Transfer RNA biogenesis [BR:
atr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
18448433
Prokaryotic type
18448433
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
V4R
Motif
Other DBs
NCBI-GeneID:
18448433
NCBI-ProteinID:
XP_006858556
UniProt:
U5DHQ0
LinkDB
All DBs
Position
Unknown
AA seq
367 aa
AA seq
DB search
MQEFQVPIQTKRTLDSPAHNSKAPKISKSQEEEDEGEEEAEYCREKMTENPRVQRYLVAL
EYIGTRFSGSQKQPNCRTVMGALEEAFHKFIGQPVSIAFSSRTDAGVHALSNVCHVDVER
ISKRKPNELLPPHEPGVVKRAVNHFLQKDGGDMMVIDVRFVPPDFHARFMAQERTYFYRL
LSSPEPLSTFEKERAWHVPEDLDIHAMGAACGVLVGHHDFSSFRAAGCQAKSPVKTLDEL
HVSEVLPSPNFPTAFERTHNNTIEETNASKRDAADEEDLNGSRKCRQFGQRRTHQCYVIT
ARARSFLYHQVRLLVGVLKAVGSGVLTVADVKCILEAKDVTAASPMAPASGLYLGIVKYN
FDSDAER
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgcaagagtttcaagttccaattcaaacaaagagaaccctagattctcccgcccataat
tcgaaggcccccaaaatttcaaaatctcaggaagaggaagacgaaggggaggaagaagca
gaatattgcagagagaaaatgactgaaaaccctagagttcagagatacttggtggcttta
gaatacattggaactcgtttttcaggctctcagaaacaacccaattgtagaactgtaatg
ggtgctcttgaggaggcctttcacaaatttattggacaaccagtgtcaattgctttctct
agtcgaactgatgcaggagttcatgcattgtcaaatgtttgccatgttgatgtggagcgc
ataagcaaaaggaagcctaatgaattgttgccgcctcatgaacctggagttgtcaaaaga
gctgtcaaccattttttgcagaaggatggaggtgatatgatggtgatcgacgttcggttt
gtccctccagattttcatgctagattcatggcccaagagcgaacctatttctatcgctta
ctctctagccctgagccactgtcgacatttgagaaggaaagagcatggcatgtgcccgaa
gatcttgatattcatgctatgggggcggcatgtggcgtccttgttggacatcatgacttc
tcttcatttagagctgctggttgtcaggcaaaatctccagtgaaaaccttagatgagctt
catgtctccgaagtgcttccatctcccaactttccaacagcttttgagaggacacacaat
aatactattgaagaaaccaatgcatcgaaaagagatgcagctgatgaagaagatttgaat
ggttcaagaaaatgcaggcaatttggtcaaaggagaactcatcaatgttatgtgattacg
gcaagggcaagatcctttctctatcatcaggttcgactgcttgtgggggttttgaaagct
gttggctccggggttttaacagtagctgatgttaaatgtatcctagaagcgaaggatgtg
accgctgcgagtcccatggcccctgcttctggtctctatcttggaattgtgaaatacaat
tttgattcagatgcggaaaggtag
DBGET
integrated database retrieval system
