Amborella trichopoda: 18448509
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Entry
18448509 CDS
T02990
Name
(RefSeq) ABC transporter E family member 2 isoform X1
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
atr03009
]
18448509
Ribosome biogenesis [BR:
atr03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
18448509
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
SMC_N
AAA_21
Fer4
AAA_15
Fer4_6
AAA_22
AAA
RsgA_GTPase
Rad17
AAA_29
AAA_16
AAA_23
Fer4_21
NACHT
Fer4_2
NPHP3_N
nSTAND3
TsaE
Fer4_10
Fer4_9
AAA_33
SRP54
Fer4_4
AAA_5
AAA_24
ORC-CDC6-like
Fer4_16
Fer4_7
Fer4_3
Motif
Other DBs
NCBI-GeneID:
18448509
NCBI-ProteinID:
XP_006858622
UniProt:
U5DC51
LinkDB
All DBs
Position
Unknown
AA seq
606 aa
AA seq
DB search
MADQRLTRIAIVNSDRCKPKKCRQECKKSCPVVKTGKLCIEVSPASKIAYISEELCIGCG
ICVKKCPFDAIQIINLPKDLDKDTTHRYGPNTFKLHRLPVPRPGQVLGLVGTNGIGKSTA
LKVLAGKLKPNLGRYNNPPDWQEILTYFRGSELQNYFTRILEDNLKAIIKPQYVDHIPKA
VQGNVGQVLDQKDEREMKAELCHDLELNQVIDRNVGDLSGGELQRFAIAVVAVQNAEIYM
FDEPSSYLDVKQRLKAAQVVRSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGIYGVV
TLPFSVREGINIFLAGFVPTENLRFRDEYLTFKVAENPQESAEEIQTYARYRYPTMSKTQ
GNFKLTVVEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDVIEGSDVEIPEFNVSYKP
QKISPKFQHTVRHLLHQKIRDSYMHPQFMSDVMKPLQIEQLMDQEVINLSGGELQRVALC
LCLGKPADIYLIDEPSAYLDSEQRIVASKVIKRFILHAKKTAFVVEHDFIMATYLADRVI
VYEGKPSVDCTANAPQSLLTGMNLFLSHLDITFRRDPTNYRPRINKLDSTKDREQKSAGS
YYYLDD
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcagcgactgactcgtattgctatcgtaaattctgatcgctgcaagcccaag
aaatgccgccaagagtgtaaaaagagctgccctgttgttaaaacgggtaaactttgtatc
gaggtttcgcctgcctcaaagattgcttatatttcagaagagttgtgcattggatgtggt
atttgtgtgaagaaatgcccatttgatgctatccagataatcaatctgcccaaagatttg
gataaagatacaactcatcgatatggcccaaacacgttcaagttgcacaggttgccagtt
ccaagacctgggcaagtccttggacttgttgggacaaatggcatagggaagtcaactgct
ctcaaagttttggctgggaaattgaaacctaatttgggtcggtataataatcctcctgat
tggcaggaaatattgacatatttccggggatcggagcttcaaaattatttcactcgtata
ttggaagacaatttaaaggctatcataaagcctcagtatgttgatcacatacctaaggca
gtgcaagggaatgttggtcaggtgcttgatcaaaaagatgagagggagatgaaggctgaa
ctctgccatgatctagagttgaatcaggttatagatcgaaatgttggggacctatcaggt
ggagaactgcagaggtttgctattgctgttgttgcagttcagaatgctgaaatatacatg
tttgatgagccatcaagttatcttgacgtaaagcaaaggctaaaagccgcacaagtagtt
cgatctttactccgtccgaacagctatgtgatcgttgttgaacatgacctgagcgtcctt
gattacttatctgacttcatttgctgcctttatgggaagcctggaatttatggagttgtg
acacttccattttctgtccgagaaggaatcaatatctttttagcgggatttgttcctact
gagaatcttcgtttccgggacgagtacctgacattcaaggttgcagagaatccacaggaa
agtgctgaggaaattcagacctatgcacgatatagatacccaaccatgagtaaaactcag
ggaaatttcaagcttacagtggttgagggtgaatttaccgattctcagattattgtaatg
ttgggtgagaacgggactgggaagacaacatttatccgcatgcttgctggtctactgaaa
cctgatgtgatcgaaggttcagatgtggaaattcccgaatttaatgtttcttacaagccc
cagaagattagccctaaattccagcacactgtcagacatttactgcatcagaaaattcgg
gattcatatatgcatcctcagttcatgtcagatgtcatgaaaccccttcaaattgagcaa
ctgatggatcaggaagttataaatctatcgggtggagagttgcagagggtagcactttgc
ctctgtctcggcaagcctgctgacatctatctaattgatgagccaagtgcatatctggac
tccgagcagcgtattgtggcttcaaaggtcatcaagaggttcatccttcatgccaagaag
actgcttttgttgtggagcatgactttataatggcgacttacctggcagacagagttatt
gtgtatgagggaaagccatcagtggattgcactgcaaatgctcctcagtccctgttgact
ggaatgaacttattcttgtcgcatctggatattacattcaggagagatccgaccaattat
aggcctcgaatcaacaaattggactctacaaaggacagggaacagaagtctgctgggtcc
tattactatctagatgattga
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