Amborella trichopoda: 18448520
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Entry
18448520 CDS
T02990
Name
(RefSeq) uncharacterized protein LOC18448520 isoform X1
KO
K13130
gem associated protein 2
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atr03041
]
18448520
Spliceosome [BR:
atr03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
18448520
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SIP1
Motif
Other DBs
NCBI-GeneID:
18448520
NCBI-ProteinID:
XP_006858643
UniProt:
U5DD27
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MGTQDDKEHQTLTAITIANTNSNQSSSSSSLLNKKEEEFNISLGFQSGCDDGNFNNREIR
CDGSDADVIDREKCCDDDIHFCFHGGDGSSRKKYNRDEMQPLQFANKQWQMVRWIEIYTA
IPAIVKTELHGLSADASSVSDQGKGRRRDKPKKKKPHLHGDHLQPGRVHFENIEQAYEEL
HLPEVVSNSLVNGQELDENEDSDIEDNSLLKPAFQVEGDPDFESGPPQDGLEYLRRVRWE
AAHIPNVKVANIDERKLKAEQTSYMPNIPDIPSCPNHLLPSKQWEDAFLADFSELRQAIS
QLEYVGRQPACASNSPLHEENNVPKAAHLLSQILYMDAVTRANLLRQCALVIEEVNSLSR
GDCIRLFGIFAAVEKPLDGDTSAAVRGVLRKCASLRASKTECNDEVVMLNLLITIASKYF
GQSES
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgggcactcaggatgacaaggaacatcaaaccctcaccgccattaccatcgccaacacc
aacagtaaccaatcctcgtcctcttcttctttactgaataagaaagaggaggagtttaac
atttcgttagggtttcaaagtggttgcgatgacggaaattttaacaatagagagattcgt
tgtgatggcagtgatgcagatgttattgatcgagagaagtgttgcgatgatgatattcat
ttttgttttcacggcggcgacggtagttccaggaaaaaatacaatagggatgagatgcag
cccttacagtttgcaaacaagcagtggcaaatggttaggtggattgagatttatacggcc
attccggccattgtcaaaaccgagcttcatggcctttcggcggatgcttcgtcggtgtct
gatcagggcaagggcaggcgccgcgataagcccaagaagaagaaacctcatcttcatggc
gatcatctccaacctggcagggtgcacttcgaaaatattgagcaagcatatgaggaactc
catttgcccgaggttgttagtaatagcttagtgaatgggcaagagcttgatgaaaatgaa
gatagtgatattgaggataatagccttctaaaacctgcctttcaggtggaaggtgatccc
gactttgaatcgggtccaccacaagatgggcttgagtacttaaggcgtgtgaggtgggaa
gctgcacatattccaaatgttaaggttgcaaacattgacgaaaggaaattgaaggcagag
cagacgtcctacatgcctaacattcctgacatcccaagctgtcccaaccatctgttgccc
tcaaagcagtgggaggatgcatttttggccgatttttctgagcttagacaggcgatatca
cagctcgaatatgtgggcaggcaacctgcttgtgcatcgaattctccacttcatgaagaa
aacaatgtgccaaaggcggcacatttgctttcccaaattttgtatatggatgcagttacc
cgggcaaatttgttgaggcagtgtgcattggtgattgaggaagtcaatagcttatcgagg
ggcgattgtatccgcctgtttgggatatttgcagccgtggagaagccacttgatggagac
acaagcgcagccgtgcgtggtgtgctaaggaaatgtgcaagccttcgtgcctcaaagacc
gagtgcaatgatgaggttgtgatgctcaatttgcttataaccattgctagtaaatatttt
ggccagtcagagagctaa
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