Amborella trichopoda: 18448546
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Entry
18448546 CDS
T02990
Name
(RefSeq) probable E3 ubiquitin-protein ligase ARI8 isoform X1
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atr04121
]
18448546
Enzymes [BR:
atr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
18448546
Ubiquitin system [BR:
atr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
18448546
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IBR
IBR_1
IBR_2
UBA_ARI1
Ariadne
UBA_ARIH2_N
ZapD
Rcat_RNF216
Motif
Other DBs
NCBI-GeneID:
18448546
NCBI-ProteinID:
XP_006858669
UniProt:
U5D3H3
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MDSEDDMHDANDVESLDDFYSGETALASDEDDGDYEFIDNDSDDSEDRTSHRQQQNYIIL
SEEDICVRQEEDITGISTVLFISRVAASILLRHYNWDVSKVHDAWFVDEEGVRKTVGLLE
KPVVEFNLSPKEPTCGICFETYPCERMNAAACGHHFCCACWTGYISTSINDGPGCLMLRC
PDPSCGAAVGQDMINMLASEDDRDKYSRYLLRSYVEDNKKTKWCPAPGCEYAVDFVVGSA
SYDVSCNCSYNFCWNCTEEAHRPVDCETVAKWILKNSAESENMNWILANSKPCPKCKRPI
EKNQGCMHITCTPPCKFEFCWLCLGSWSDHGERTGGFYACNRYETAKQEGVYDETEKRRE
MAKNSLERYTHYYERWATNQSSRAKALSDLQQMQAVQLEKLSDKQCQPGSQLKFITEAWL
QIVECRRVLKWTYAYGYYLPEQEHAKRQFFEYLQGEAESGLERLHQCAEKELHVYLEAVG
PSKDFNEFRTKLAGLTSVTRNYFENLVRALENGLSDVDTHGACSRTSSSKNLGGGGGSKS
RGGRGKITSQRPFPSQTKGLDDTNHWSCQHCTFANLNSATTCHMCHNRR
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggattccgaggatgacatgcacgacgccaatgatgtggagtccctcgatgatttctac
agcggagagacggccttggccagtgatgaagatgatggggattacgagttcatagataat
gatagtgatgattcagaggatcgaacttcacataggcagcagcagaactacataattttg
agtgaagaagacatatgcgtacgccaagaagaggatataacagggatatccactgtactt
ttcatatcgagagtggctgcaagcatactcttgcgtcactataattgggatgtcagtaag
gtccatgacgcatggtttgttgatgaggagggagttcggaagactgttggtttgctggag
aagccagttgtggaatttaacttaagtcccaaagaacctacttgtgggatatgttttgag
acttatccttgtgagcggatgaatgctgctgcttgtggtcatcatttttgttgtgcatgt
tggacaggttacataagcacatcaataaatgatggtcctggatgcttgatgttgcgatgc
cctgatccatcgtgtggtgctgctgttggtcaagatatgatcaatatgctggcttctgag
gatgatagggacaagtattcgcgttatcttcttaggtcctatgttgaagataataaaaag
acaaaatggtgtccagctcccggatgcgaatatgcagtggactttgttgttggtagcgcg
agctatgatgtttcttgcaactgctcatataatttctgctggaattgtactgaggaagct
catcgtccagttgactgtgaaacagttgccaagtggatcttgaagaatagtgctgagtct
gaaaacatgaactggatattagccaattctaagccttgtccaaagtgcaagcggccaatt
gagaaaaaccagggttgtatgcatattacctgcactcctccttgcaaatttgagttttgc
tggctgtgccttggttcatggtccgatcatggcgaacgtacaggtggtttctatgcttgc
aatcgttatgagacagcaaaacaggagggagtgtatgatgaaactgagaaaagaagagag
atggctaaaaattctttggagaggtacacgcattactatgagcgttgggcaaccaaccag
tcgtcaagggctaaggcactctcggatcttcaacagatgcaagctgtgcagcttgagaag
ttgagcgacaagcaatgtcaacccggatctcaactcaagttcatcacggaggcctggtta
cagatagttgagtgtaggcgagtactaaaatggacatatgcctatgggtattacctccct
gagcaggagcatgccaagcgtcaattttttgagtatctgcaaggtgaggctgagtctggt
ttagaaaggcttcaccaatgtgcagaaaaggagttgcacgtttacctagaggcagtgggc
ccttccaaggatttcaatgagtttcgtacaaagctagcagggctgaccagtgtaacccga
aattacttcgagaacctggttcgtgcccttgagaatggactatctgatgtcgacacccat
ggagcgtgtagccggacgagtagctcgaagaacctcggtggtggtggtggcagcaaaagt
agagggggaaggggcaagattacgagccaaaggcccttcccaagccaaaccaaaggtctc
gacgacactaaccactggtcttgccaacactgcacctttgccaatctcaactcggctact
acatgccatatgtgccacaaccgtcgatga
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