Amborella trichopoda: 18448563
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Entry
18448563 CDS
T02990
Name
(RefSeq) SUPPRESSOR OF ABI3-5 isoform X3
KO
K13094
RNA-binding protein 5/10
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atr03041
]
18448563
Spliceosome [BR:
atr03041
]
Complex A
Other components
Complex A specific factors
18448563
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
OCRE
G-patch
G-patch_2
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
18448563
NCBI-ProteinID:
XP_011628680
LinkDB
All DBs
Position
Unknown
AA seq
1063 aa
AA seq
DB search
MDPGRYVLPPQGWETNSALEGYGSVHEPDFRVGGSYGGRRFPDDGYSRDALYPNGGFHRD
ILERDSYPPPPPPPVVGGWPPQRRRDFEEDIGYIRDPRRHEKAPYLDSFRDVDAYRDVDK
YRDIDSYHDADKYQDIESYHSNYRDTDGYRDYDFDRPARFGGRERDDFGSDDYDSRHRTP
HQARDGSRERDYDYRRHEYDSDLERDGRNSSWRRRDRERDRRGLSRERYQSPPRRQRERS
RSYGYDDRDRSRSPRGRSRGRSYREGSHDDGRYDRSERRRDRDDRRHHENLSVAPSATLV
VKGLSQKTTEEDLYQILAEWGPLRHVRIIKERNSGLSRGFAFIDFPSVEAARSMMDGVGD
DGLVVDGRRLFFEYSSKPTGSTGGHSSPKAGNYKSSSMPSDWMCVVCGCVNFARRTSCFQ
CNEPRTDDAPAADVASSNPTPVGKKGSEAGPTHVLVVRGLDENADEEMLRYEFSKHAPIK
DLRLVRDKFTHVSRGFAFVHFHSVDDATKALEATNGTTLEKNGQLLRVAYAKSIHGPGSG
SAAGSQSSSLAAAAIEAATFAQQYDAVGWAPKEYNPDEKQSAGGGPDKQAEGHAEGGNST
PRMPEGGSAPQSGFVWDEASGYYYDAASGFYYDGNTGLYYDGNNGLWYSYDNQTQQYIPC
ANQSENKASEKSTTEPSKPSDRKVVISAPAATITSNDNKKASLPDAVHAAATAALAAEKK
EKEKQKEIKLASKSSILANKKKMNNVLSMWKQRNHEGQAARVVLDNDQSSTNDNKPKPKP
ETIKEGTGSGPGFTSVGRGSNINNNAANSSATGDLSAKPVPVSNSSGGTLMGVIRGSGRG
VVKSDTVYIAGSSSSPSVGGVSTPNRSIDNEVPTTTNVATPFRTDASALGSYAPIVGGNT
KRRFSEMPQPGTREQGQPTVTGYRDRAAERRSLYGSSLGTVDDLADLDIGDRSREMPFPP
GVGGRPAAMPEGPSYDVITADRAIDGTNVGKRMLRNMGWQEGSGLGKDGSGIIEPVQAQG
TGERAGLGSQQRKPLDPRFEPQSGDTYRTVIQKKAIARFREMS
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atggatccaggacgctatgttcttcctcctcaaggatgggaaactaacagcgctttggag
gggtatggttctgtccacgagccggatttcagggttggtggttcttatggggggaggaga
tttcctgatgatggttactcaagagatgccctctatccgaatggtggctttcatcgagac
atacttgagagggatagctacccacctccacctccacctcctgttgttggtggttggcct
ccacagagaagaagagattttgaagaagatattggatacattagggaccctcgaaggcat
gaaaaggcaccataccttgattcgttccgtgatgtcgatgcttaccgtgatgtggacaag
taccgtgacatcgattcataccatgatgctgataaataccaggacattgagagctaccac
agtaattatcgggataccgatggctaccgtgattatgattttgataggcctgcgaggttt
gggggccgtgaacgtgatgattttggttctgatgattatgactctaggcaccgtacccca
caccaagccagggacggtagtcgtgaaagggattatgattaccgaaggcatgaatatgat
tctgatcttgagagagatgggagaaacagtagctggagacgtcgtgatcgtgaaagagat
agaaggggtttgagtcgagagaggtatcaaagcccaccaaggaggcagcgtgagcggtct
cggtcttatgggtatgatgatcgagataggtcaagatctcctcgtggccgcagccgtggt
agaagttatcgagaaggaagccatgatgatggtcgctatgataggagtgagagacgaagg
gatcgggatgatagacgacatcatgagaatttgtcagtggctccctcagccacgcttgtt
gtgaagggtttatcacagaagacaacagaggaagatttgtatcaaattcttgctgagtgg
ggacctctgcgtcatgtacgtataattaaagagaggaattcgggtttatctcgtggattt
gcttttattgattttccatctgtggaagcggcacgtagcatgatggatggagttggagat
gatggtttggttgttgatggtaggagactcttttttgagtacagtagtaagccaactgga
agcacaggtggacattcttctccgaaggcaggaaattataaaagcagctctatgccatct
gattggatgtgtgttgtctgtggctgtgtgaattttgctcgtcgaacgtcctgttttcag
tgtaatgaacccaggactgatgatgctcctgcagctgatgtagcatcatccaatcccaca
ccagtaggaaagaagggttcagaggctggacctacacatgtgttagttgttcgaggcttg
gatgaaaatgctgatgaggaaatgcttcgatatgaattctctaaacatgctccaattaag
gaccttcgccttgtacgtgacaagttcacccatgtatccaggggatttgcttttgttcat
tttcattcggtagatgatgctacaaaggcattggaagcaacaaatggcacaacactcgaa
aagaatgggcagcttttaagagtcgcatatgcaaaaagcattcatggaccaggttctgga
tcagctgctggttctcaatcaagcagtcttgcagctgctgcaattgaggcagctacattt
gcccaacagtatgatgctgttggatgggctccaaaagaatacaatccggatgaaaagcaa
tctgccgggggaggacctgataaacaggctgagggacatgcagaaggtgggaactcaacc
ccccgaatgcctgaaggtggatcagctccccaatctggtttcgtatgggatgaagcatct
ggctattactatgatgcagcttcaggattctactatgatgggaacacaggcctctattat
gatggcaataatgggttgtggtattcatatgataaccaaacgcaacaatacatcccctgt
gccaaccagagtgaaaacaaggcatctgaaaaatccacaactgaaccgtcaaagccatca
gaccgaaaagttgttatatctgcccctgctgctaccataacttcaaatgacaacaaaaaa
gcctcattacctgatgcagtgcacgctgctgcaacagctgcactggctgctgaaaagaaa
gagaaggagaagcaaaaggagataaagttggcttcaaagagtagcattttagctaataag
aagaaaatgaataatgtattgtcgatgtggaagcaacggaaccacgagggtcaagcagct
cgtgtagtccttgataatgaccaatcatcaaccaatgataacaagcccaagcccaagcct
gaaaccataaaggagggcacaggatcaggtcctggattcacatctgtgggccgagggtca
aacattaataataatgcagccaattctagtgctacaggagatttatcagcgaagcctgta
cctgtgagtaatagctcagggggcaccttgatgggggttatcaggggctcaggtagagga
gtagtgaagtcagatacagtatatatagccggttcttcttcttctcctagtgttggtgga
gtttctactccaaatcgttctattgacaatgaagtgcctactactactaatgtggcaact
ccatttagaactgatgcttcggctttgggttcttatgctccaattgttggagggaacaca
aagcgaaggttttcggagatgcctcagcctgggactagagaacaaggacagcctacagtt
acggggtatagggatcgggctgcagagaggaggagcctatatgggtcgtccttgggaacg
gtggatgatttggctgaccttgatattggagatagaagtcgtgagatgccattccctcct
ggtgtgggagggcggccggctgccatgcctgagggcccgagttatgatgtgatcacagca
gatagggccattgatggcaccaatgtgggcaaacgcatgttgcgaaacatgggctggcaa
gagggttcgggattagggaaggatgggagtgggataatagagccagtccaggctcagggt
acgggtgaaagagccgggctcggcagccaacaaaggaagcctcttgacccacgcttcgag
cctcagtccggggacacgtatcgaactgtgatccagaagaaggctattgcaaggttcagg
gagatgtcctag
DBGET
integrated database retrieval system