KEGG   Amborella trichopoda: 18448734
Entry
18448734          CDS       T02990                                 
Name
(RefSeq) U3 small nucleolar RNA-associated protein 6 homolog
  KO
K14557  U3 small nucleolar RNA-associated protein 6
Organism
atr  Amborella trichopoda
Pathway
atr03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:atr00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    18448734
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:atr03009]
    18448734
Ribosome biogenesis [BR:atr03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    18448734
SSDB
Motif
Pfam: U3_assoc_6 UTP6_C HAT_PRP39_N TPR_14 HAT_Syf1_CNRKL1_N HAT_PRP39_C Suf SPOB_a
Other DBs
NCBI-GeneID: 18448734
NCBI-ProteinID: XP_006858857
UniProt: U5DCR1
LinkDB
Position
Unknown
AA seq 661 aa
MADVIQFKLEKMLDELDDVVKRGIFTKPEASMILKKRRDFEYRLKRPCSLKQDYLAYIHY
EKQLDALRRLRKKASRRQDTEDENKRKRKKSLSDFTGVLRILETYKRAVTRFKGDLNIWF
EYLEFCRERGHGRMKRALAQALRFHPNVPGLWIYAAAWEFGQNLNVAAARALMQRGLRAC
PWSEDLWVEYLRMELTYLNKLKARKLALGNGSGSSVKVEEDDWKEQNKDLFMSLDNGDEK
SNDGDIQEAKVDEDLDAKAKVDEDLDALRKQGSDIIRTIYDAAVESLPHNLSLCKKFIEI
LENADVANMDGIKEDMTSSIHKEFLRDESYWDWLARRELSRGDKERTEEDMLCQLNKAVQ
VYEEALSVVPSPKLFELYAALWSEIIASEGGSEVVGFSNLVSNVPQFISTLLEVYEKAES
CGCMTPDLALQYISMYLKLGKLEEARKLAAKLCIGGSSGKTKLWLGRLLTEIKWVTTKSA
AISKDDQQSLFELFKCILTKLTIPEAESLWLMALKIFSNQRDHIDKLVEICLRQLAGGGD
CEACGSVSCALLNCALQRGGIQRARDIYKQFLALPHPSLGIYKCCIELESNLASLGDGRS
LQNARKLHESCLSFYGQNAGLWRDYYFLELKVGTPKTASAIYWRAKKTLFDASELFQPCH
P
NT seq 1986 nt   +upstreamnt  +downstreamnt
atggcggacgtcatccagttcaaactggagaaaatgctcgatgagcttgacgacgtggtt
aaacgagggattttcacaaaacctgaggcttccatgattctgaagaagagaagggatttt
gagtaccggctgaaaaggccctgctctcttaagcaggactatctggcctatatacattat
gagaagcagcttgatgctctgagaaggctgagaaagaaggcttccaggcggcaggatacg
gaggatgagaataagaggaaaaggaagaagtctctctctgactttactggtgttttgagg
atattggagacatacaagagggcggtgaccaggttcaagggggatttgaatatctggttt
gagtatttggagttttgcagagaacgaggccatggccgaatgaagagggcactcgctcag
gcactccgtttccatccaaatgtccctggcctttggatatatgctgctgcctgggagttt
gggcagaatttaaatgttgcggctgctcgtgcactaatgcaaagagggttgagagcatgc
ccctggtcagaggatctttgggtcgaatatcttcgaatggaattgacttacctcaataaa
ttgaaggctcggaagttggctctaggaaacggttcaggaagttcagttaaggttgaagag
gatgattggaaagaacaaaacaaagatttatttatgtcactagataatggagatgaaaaa
tcaaatgatggggacattcaagaagctaaggtggatgaggatttggatgctaaagctaag
gtggatgaggatttggatgcccttcgaaagcagggctctgatatcatacggactatttat
gatgcagcagttgaatcccttccccataacctaagtttatgcaagaaatttattgaaatt
ttggaaaatgcagatgtagcaaatatggatggaataaaggaggatatgacaagtagtatt
cacaaggagttcttgagggatgaaagctattgggactggctagcaagacgtgaactttct
agaggagacaaggaaagaactgaagaagatatgctttgtcaattgaataaagcagtgcaa
gtttatgaagaagcattgagtgttgttccttctcccaaattgtttgagctatatgctgcc
ctctggtctgaaatcattgcttctgaaggaggttcagaagttgttggtttcagcaactta
gtgtccaatgttccacagttcatatcgactttattggaagtttatgaaaaggctgagtct
tgtgggtgcatgaccccggatcttgccctacagtatatttccatgtacttgaagcttgga
aaattggaggaagccagaaaactggcagcaaagctttgcattggtggaagctcagggaaa
acaaaattgtggcttggaaggcttttaactgagataaagtgggtgacaacaaagtctgct
gctataagtaaggatgatcagcagtctttatttgagctcttcaagtgcattttgacaaaa
ttaacgatcccagaagctgaaagcttatggctcatggctttgaagattttctcaaatcag
agggaccatattgacaaactggtggagatttgtttgagacagcttgccggtggaggtgac
tgtgaagcatgtgggtcagtatcttgtgctctcctgaattgtgctcttcaaagaggagga
attcagcgtgcaagagatatatataagcaattcctggctctgccccatccaagccttggg
atctacaagtgttgtattgaattggaatcaaacctcgcatcgctaggcgatggtcgctct
cttcaaaatgctcgcaaattgcatgagtcttgtctcagtttctatggccaaaatgctgga
ttgtggcgggattattattttttggagttaaaggtgggaacacccaaaactgctagtgcg
atttattggcgggcaaagaagactctctttgatgccagtgagttgttccagccgtgccat
ccttga

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