Amborella trichopoda: 18449097
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Entry
18449097 CDS
T02990
Name
(RefSeq) E3 ubiquitin ligase BIG BROTHER-related isoform X1
KO
K19045
E3 ubiquitin-protein ligase BIG BROTHER and related proteins [EC:
2.3.2.27
]
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atr04121
]
18449097
Enzymes [BR:
atr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
18449097
Ubiquitin system [BR:
atr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
18449097
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-RING_16
zf-C3HC4_3
zf_RING_Vps8_fungal
zf-ANAPC11
zf-RING_Vps41
PHD
Prok-RING_4
zf_RING_Vps8
zinc_ribbon_16
Prok-RING_1
VPS18_RING_C
zf-C3H2C3
zf-RING-like
PHDvar_NSD
RINGv
Motif
Other DBs
NCBI-GeneID:
18449097
NCBI-ProteinID:
XP_006859208
LinkDB
All DBs
Position
Unknown
AA seq
287 aa
AA seq
DB search
MHSPIFQSSTLFSPLSVFPNLLRSSSMGSNNDGKELNNNGAGEVNSDADFGSPINARVPF
TNLSQVESDRAIAKTLQQQERAYMMFKRDRELAEDSLSTSTSYGDGDYEEEEEDSDAEDD
DYDDEFDVESHISARREQIDGETNERDIERDEAHDMADRMSALAGINDWEIENLEELSTN
YEDTSEDVDPDELSYEELIALGEVVGTQSKGLSSNIISSLPSIVFRPASANDGNLDQCAI
CQVDYEEGEALVNLPCKHAYHLECINNWFQINKVCPVCNKEVSTLNK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgcattcccccattttccaatcctccactctcttctcccctctctctgtgttcccaaac
ttgttgaggtcttcttcaatgggtagtaataatgatgggaaggagctaaacaataatggg
gcaggagaagttaacagtgatgctgattttggctctccaataaatgctagggttcccttc
actaacctcagccaggtggaatctgatcgggctattgcgaagactctacagcaacaggaa
agagcatatatgatgttcaagagggacagggagttggctgaagactcactgtccacaagt
accagttatggtgatggagactatgaagaagaggaagaagatagtgatgccgaagatgat
gattatgatgacgaatttgatgttgaatcacatatcagtgcgagaagggagcagattgat
ggtgagacaaatgaaagggatatagaaagagatgaagctcatgacatggctgatcgtatg
tcagcccttgctggcattaatgactgggaaattgagaatttggaagaactcagcacaaac
tacgaggatacatctgaagatgttgatccagatgagttgtcctatgaggagttgattgca
ctaggtgaagtagttggaacacaaagtaaaggcctatcttccaatatcatatcatccttg
ccttctattgtttttaggcctgcatctgccaatgacggcaatcttgatcagtgtgcgata
tgtcaagtggactatgaagaaggagaagcactcgtgaaccttccctgtaaacatgcatac
catttggagtgcataaacaattggtttcaaataaacaaggtatgtcctgtctgcaataaa
gaggtttcgactttgaacaaatag
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