Amborella trichopoda: 18995758
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Entry
18995758 CDS
T02990
Name
(RefSeq) ubiquitin receptor RAD23d
KO
K10839
UV excision repair protein RAD23
Organism
atr
Amborella trichopoda
Pathway
atr03420
Nucleotide excision repair
atr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
18995758
09124 Replication and repair
03420 Nucleotide excision repair
18995758
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
atr03051
]
18995758
03400 DNA repair and recombination proteins [BR:
atr03400
]
18995758
Proteasome [BR:
atr03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
18995758
DNA repair and recombination proteins [BR:
atr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
18995758
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
UBA_7
CUE
UBA_RAD5A
TECR_N
Crinkler
Rad60-SLD_2
Ubiquitin_2
Transglut_prok
Dsc3_N
Phasin_2
Permuted_GreAB-C
Motif
Other DBs
NCBI-GeneID:
18995758
NCBI-ProteinID:
XP_006846642
UniProt:
W1PEF1
LinkDB
All DBs
Position
Unknown
AA seq
389 aa
AA seq
DB search
MKLFVKTLKGSHFEIEVEPSDTVSAVKKNIETIHGQDVYPAAQQLLIHQGKVLKDDTTLL
DNKVAENNFLVIMLTKTKAPAGGGTSTTSSATAQVQPPSSSPPNPPTSAPPAQTAATPSP
PVAAAPTTVNQPATALLSSGDADVYGQAASNLVAGSNLEQAIQQILDMGGGSWDRDTVVR
ALRAAYNNPERAVEYLYSGIPEQAEAPAPVARSPASGPAVNPSVQAPQAAQPAVPSSGPN
ANPLDLFPQGLPNMGGAAGAGTLDFLRNSQQFQALRDMFQANPQILQPMLQELGKQNPQL
MRLIQEHQADFLRLINEQPAEGAEGNLLGQLASAMPQAVTVTPEEREAIERLEALGFDRA
LVLEVFFACNKNEELAANYLLDHMNEFEE
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcttcgtgaagacattgaagggaagtcactttgagattgaagtcgagcctagt
gacacggtatctgctgttaaaaagaacattgaaactatccatggccaagatgtataccct
gcagcacaacagttgttgatacaccaggggaaggttttgaaggatgataccactttgttg
gataacaaggttgctgaaaacaactttcttgttattatgttgactaagacaaaggcccca
gctggtggtgggacttcaactacttcgagtgcaacagctcaggtgcaacccccgagttct
tcgcccccaaatccaccaacttcagctccaccagcgcaaactgcagcaacaccgtcacct
ccagtggctgcagcccctaccactgttaatcaaccagccactgcccttctaagcagtggg
gacgcagatgtgtatggtcaggcggcatcaaatcttgttgctggcagcaatctagagcaa
gctatccagcaaattcttgacatgggtggtggtagctgggacagagacactgttgttcgt
gctttacgtgctgcttataataatcctgagagagcagttgaatatttatattcgggcatc
cctgaacaagctgaagccccagcaccagtggctcgatcacctgcaagtgggccagctgtg
aatccttcagtccaggccccacaagcagctcaacctgcagttccgtcaagtggaccaaat
gcaaatccattggatcttttccctcagggtcttccgaacatgggaggtgctgctggagct
ggtactctggattttcttcgcaacagtcaacagttccaagctcttcgggatatgtttcaa
gccaatcctcagattttgcagccaatgcttcaagagctgggaaaacaaaatcctcagctt
atgagactcattcaagaacaccaagctgacttccttcgccttatcaatgaacagcctgca
gagggcgcagaagggaacttgcttgggcagcttgcttcagcaatgccacaggctgtgact
gtcacacccgaggagcgggaggccattgagcgtctggaggcgttggggtttgaccgggca
ctcgtgctagaggtcttctttgcgtgcaacaaaaatgaggagctagctgcaaactatctc
ttggaccatatgaatgaatttgaggagtga
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integrated database retrieval system
