Amborella trichopoda: 18995784
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Entry
18995784 CDS
T02990
Name
(RefSeq) nuclear pore complex protein NUP96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
atr
Amborella trichopoda
Pathway
atr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
18995784
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atr03019
]
18995784
03036 Chromosome and associated proteins [BR:
atr03036
]
18995784
Messenger RNA biogenesis [BR:
atr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
18995784
Chromosome and associated proteins [BR:
atr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
18995784
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
DUF5466
Motif
Other DBs
NCBI-GeneID:
18995784
NCBI-ProteinID:
XP_006894942
LinkDB
All DBs
Position
Unknown
AA seq
1058 aa
AA seq
DB search
MMCPMKKRKTSEVLVSRNASEMESILPVLLACDYYTVPSLSELAARECVDSGYCQRVQDF
TVGRLGYGVVKFLGETDVRWLKLDQVIQFNQQEVVVYEDGYGKPLIGMGLNKAAEVTLVL
KVKVGKDEVIGGQNNLELEKLRMKLKGVNERQGARFISYDPSSHQWKFLVPHFSRFGLDA
EDDIDMVPIDNNNQQELGPIVKEVSQDVNEEDEMRMDVSPSAGPSGSALVHSLPAHLGLD
PLKMQEMRMLMFQNGEENEDENGSLVHKTRSSRKEGADGGVHGSVLQLSAKKSSHNVSPN
NTSSNSSPFKILSPLSPSLPNKQALLDYISKSGSASPPRNILMIGQNKGTPTKTTKVKGF
KLDPKHETPIGTRSNIIADAGLFMGRSFRVGWGPNGLLVHSGTPICDVNASKGLSSIIHI
EKVALDATVRDEDKKVKEDLINLRFDSPLRLHRSLRQDITEIETGSFKLKLQKLVCSRSR
LPEVCRGHVAFVERQLDVSGLSRAERTILMHQVMAWELINVLFSEREAKGSSESAEMDDA
MDMMLDKRVDYPDVESEAEPLIRRSDFSSWLQESVCHRVQEEMSRLNEGRYLETIFSLLT
GRQLGAAVELAVDKGDVRMACLLSQAGGSMVNRSDMTAQIDVWKMDGLDFNFIEKERLKL
YELLSGNIHGALLDSELDWKRHLGLLMWYHLPPDTSLPVIVQTYQQLLHEGRAPYPIPFY
VDEGPLEEATGLNFGGHFDLTYYLMLLHANRANSTAILKTMFSSPSSTYDALDYHMIWHQ
RSVLEAIGALDYKDFYVLDMSFVSQLLCLGQCHLAIYVVLHMPQHDDHPHLHASIIREIL
FQYCETWSSHEMQRKFIEDLGIPSAWMHEALAVYYQYYGDLSMALDHLLESSNWQRAHSI
FMTSVSHSLFLSSQHSEIWRLAISMEGHKSEIADWDLGAGIYIYFYLLKSSFEDENTMAE
FDSLEKKNDECRAFFSRLKDSLSVWGNRLLPAARGTYSKMAEELSTLLSSRISKGSTRSS
QLSCLDTILDAPMPEDIRSCHLQDAISVFTFWLSEVAS
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgccccatgaagaaaagaaaaacatcagaagtcctggtatctcgaaatgccagt
gagatggaatctatactaccagttcttctagcttgtgactattatacagtgccttcattg
tcggaactggctgccagagaatgtgtggactcgggatattgtcaaagagttcaagatttt
acggttggaaggttgggttatggagttgttaagtttcttggagaaactgatgtgagatgg
cttaaactagatcaagttattcaatttaaccagcaagaggtggtggtttatgaagatggc
tatggaaagcctttgataggcatgggccttaacaaagctgccgaagttaccttagtacta
aaagtgaaagtgggtaaagatgaggttattggtggtcaaaacaatctggaattagagaag
ctcaggatgaagttgaagggtgttaatgagaggcagggggctcgtttcatctcttatgac
ccatctagccatcaatggaagttcttggtcccacatttcagcagatttggacttgatgct
gaagatgacattgatatggtgcccattgacaacaataaccaacaagaacttggtcctatt
gttaaggaagtgtcacaagatgtaaatgaagaagatgagatgagaatggatgtgtcccca
tcagctggtccttctggaagtgccctagttcattctctacctgcacatctcgggcttgat
cctctaaagatgcaagaaatgaggatgttgatgtttcaaaatggagaagaaaatgaagat
gaaaatgggtcacttgtgcacaaaactaggtcatctaggaaagaaggtgctgatggtggg
gtccatggatctgtcttgcaactttcagctaaaaagagtagccataatgtaagtccaaat
aacacatcaagtaactcaagtccatttaagatattgagtcctttaagcccttctttgccg
aataagcaagctttgttagactacatttcaaaatcagggagtgcaagtcctcctagaaac
attctcatgattgggcaaaacaagggcacacccacaaagacaacaaaagttaagggcttt
aagctggacccaaaacatgaaacccctattggtacccgttccaacatcatagcagatgct
gggctttttatgggaaggtcgtttcgtgtcgggtggggcccaaatggtttacttgttcat
agtggtacacccatatgtgacgtcaatgccagcaaaggactatcatctataattcacatt
gaaaaagttgcacttgatgcaacagtcagagatgaggataaaaaggtcaaagaggatctt
atcaatcttcgttttgattctccattgaggcttcacaggtcgttacgccaagatatcact
gaaatcgaaacgggttcattcaaattgaagctacagaagcttgtatgcagccgttcaagg
cttcctgaggtttgcaggggtcatgtagcatttgtcgaaaggcagctcgatgtctcgggc
ttatctagagcagagcgtaccatattgatgcatcaagtcatggcttgggagttgataaat
gttctattttcagagagagaagcaaaaggttcttcagagtcagcggagatggatgatgct
atggacatgatgcttgacaaaagggtagattatccagatgttgagtcagaagcggagcca
cttattcggaggtcagatttcagttcttggttgcaagagagtgtttgccaccgtgtacaa
gaagagatgagtcgtctgaatgagggacgatatttggaaaccatattctctctcttgacg
gggcggcaattgggtgccgctgttgaattggctgttgataagggagatgttagaatggct
tgtttgctgagccaagctggtgggtcaatggtgaatcgttctgatatgactgcacaaatc
gatgtttggaagatggatgggctggacttcaacttcattgagaaggaaaggttgaagtta
tatgagttactctctggaaatatacatggtgctcttctcgattcggaactggattggaaa
aggcaccttgggttgttgatgtggtatcacctaccccctgacacttcactgcccgttatc
gttcaaacttatcagcagcttcttcatgaaggaagagccccatatcccatcccattctat
gttgatgaaggtcctcttgaagaagctactgggttgaactttggtggccattttgacttg
acctactatcttatgcttcttcatgctaacagagcaaacagcacggcaattctaaaaact
atgttcagttccccttcatcaacctatgatgcattggactatcatatgatttggcatcag
cgttccgttttggaagctattggtgctttggattataaagatttttatgtgctggacatg
agctttgtttctcagctgctatgtttgggacagtgtcatttggctatctatgttgttctc
cacatgccccagcatgatgatcatccacatctgcatgctagcatcatcagggaaattttg
ttccagtattgtgagacatggagttctcatgaaatgcaacgcaaatttattgaagattta
gggattccatctgcatggatgcatgaggctttggcagtgtactatcaatattatggagat
ctatcaatggcgcttgaccatctgcttgagagttccaattggcaaagggcacattcaatt
ttcatgacttcagtatctcattcattgtttttgtcctcacaacattcagaaatttggagg
cttgcaatctccatggaggggcacaaatcagagattgcagattgggacttgggtgctgga
atttatatctacttttaccttctaaagagctcatttgaggatgaaaacacaatggctgaa
tttgattccttagaaaagaaaaatgatgagtgccgtgctttctttagtcgcttaaaggac
tctttgtctgtgtggggaaacagattactcccagctgcaagggggacatattctaagatg
gcagaggagctgtccacattgctatcatctagaatttcgaaaggctccactcgttcatca
cagctgagctgcttggataccattttagacgcacccatgcctgaggatattcggtcctgc
catttgcaagatgctatttcagtatttacgttctggttatcagaagttgcatcatag
DBGET
integrated database retrieval system
