Amyelois transitella (navel orangeworm): 106129024
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Entry
106129024 CDS
T09957
Name
(RefSeq) CXXC-type zinc finger protein 1
KO
K14960
COMPASS component SPP1
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atra03000
]
106129024
03036 Chromosome and associated proteins [BR:
atra03036
]
106129024
Transcription factors [BR:
atra03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
106129024
Chromosome and associated proteins [BR:
atra03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
106129024
COMPASS/SET1 complex (yeast)
106129024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CpG_bind_C
PHD
zf-CXXC
PHD_5
PHD_ash2p_like
Motif
Other DBs
NCBI-GeneID:
106129024
NCBI-ProteinID:
XP_013182911
LinkDB
All DBs
Position
18:join(6393733..6393759,6393836..6393957,6394145..6394308,6394505..6394631,6394898..6394999,6395388..6395571,6395814..6396011,6396414..6396623,6396978..6397225,6397436..6397541)
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AA seq
495 aa
AA seq
DB search
MGDKKYKQSKADIAKQFNLPERQSKITTLLNQAGQAYCICRSSDSSRFMIACDACEEWYH
GDCINISEREAKYIKNYFCDRCREEDPSLKTRFKPQKRENDVDSGRDDRKKKRKEKDYSE
NKSSKRPSTKDGCGDCAGCLQTHDCGHCDACEDMYGGSNKLKLKCKQRICIKSKKPSRQS
STRVKKKHHERESYDLEESIAHLQTAEARQCYGPQCTRAAQYGSKYCSSQCGIRLATARI
YQVLPQRIQEWSLSSCEAEQKNRKSLEVVRSGMAKAQAALRALDKQHADLDTIVARAKNA
TVVYTDDKEADDETLTMYCITCGHEIHSRTAVKHMEKCFIKYEAQASFGSRHRTRIDGQS
MFCDYYNPVNGTYCKRLRVMCPEHFKDPKVSDSECCGCPLVRNVFEPTGDFCRVPKKSCL
KHYQWEKLRRAEIDMERVRQWLRLDELVEQERSIRLAMASRAGVLGLMLHSTYNHEVMER
ITNKVTENGKVKEGS
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgggagacaaaaaatacaagcaaagcaaagcagatattgccaagcagtttaatcttcct
gagaggcagtccaagatcacaacattgctaaatcaagcagggcaagcatactgcatctgt
aggtcttccgacagctcacggtttatgatagcatgtgatgcctgtgaagagtggtatcat
ggtgattgcatcaacatatctgaaagagaggcaaagtatatcaagaactatttttgtgac
cgctgccgggaagaggatcctagtttaaagaccaggttcaagccacagaagagagaaaat
gatgtggattcaggacgtgatgacaggaaaaagaagcgtaaagaaaaggattactcagaa
aacaagtcatcaaagagaccaagcactaaggatggctgcggagactgtgcaggttgcctg
cagacacatgattgtggccattgcgatgcatgcgaagatatgtatggtggtagcaacaaa
ttgaagctaaagtgtaaacaacgaatatgcataaaaagcaagaaaccttcaaggcaatca
agcacaagagtgaagaagaagcatcatgaacgtgaatcatatgacttggaagaatcaatt
gctcacttgcaaacagctgaggctcggcagtgctacgggcctcagtgtacgagagctgct
cagtacggatccaaatattgttccagccagtgtggcataaggctggctactgcaaggata
tatcaggtccttcctcaacgcatacaagaatggtcgctatcaagttgcgaagctgagcag
aagaatcgcaaatctttagaagtggtccgcagtgggatggccaaggctcaagcggcgttg
agagcgctggacaaacaacacgcggatctagacacgattgttgcacgggcgaagaacgct
actgtcgtctataccgatgacaaggaagcagacgacgagacgcttactatgtactgcata
acatgcggccacgagatccactcgcggaccgccgtcaaacacatggagaagtgtttcatc
aaatacgaagcgcaggcttcgttcggaagcaggcatcgtacgaggatcgacggccagagc
atgttctgtgactactataatccagttaatggcacttattgcaagcggttgagggttatg
tgcccagagcatttcaaagatccgaaagtgagtgattcagaatgttgcgggtgtcctctc
gtccgcaacgtgttcgaacctacgggggacttctgtagggttcccaagaagtcctgtttg
aagcattaccagtgggagaaattgagaagagcagagatcgatatggagagagtgagacag
tggctgcggcttgatgaattagtggaacaagagaggagtattcggctggctatggcgtct
agggctggcgttctgggcctcatgttgcattcgacgtacaatcacgaggtgatggagcgt
attaccaacaaggtcacggaaaacggcaaggtcaaggagggctcttga
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