Amyelois transitella (navel orangeworm): 106129037
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Entry
106129037 CDS
T09957
Name
(RefSeq) zinc finger CCCH domain-containing protein 13
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atra03019
]
106129037
Messenger RNA biogenesis [BR:
atra03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
106129037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_CCCH_4
zf-CCCH
zf-CCCH_DUS3L
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
106129037
NCBI-ProteinID:
XP_013182926
LinkDB
All DBs
Position
2:join(9996264..9996829,9998251..9999467,9999557..9999717,10000660..10000750,10001104..10001321,10006316..10006411,10006593..10006710,10006945..10007279,10007379..10007594)
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AA seq
1005 aa
AA seq
DB search
MSKQGKRKITVELPKTKDLSNRPSVFERLGTKKNSSAKKTTEHCRQWAQHGSCVYGKSCK
FASTHTLISPSKQRAANNNKDTEQKRLLKDDGKSRLHSTVVVKSGRSPDGEIDNWDQNDL
EYADTDVLEKRRQQLQRELELQLKMDSGKDMRKDKKKPVSSTSSSRSSSSSSVSSSSSDG
SSSSSSSGRDARRKIKKSKLKRNSSSSSDGEPSKKKFVKSDQLKRDKSVTKKTPVKKEDR
LLKKHDIVKKKPATKAPIGKKSLSPGKKSGGTPPITSKSLSKIGTKHGKSPLRRKSASPH
STRDRDKDRNKEKERDKDRDKERERTRGRSRSPRKARSRSPRKDQKKKESSERSRPVSPK
KPVRRDGSTERHRKRSASRDRDRGRDHKDRSIERRKDKHDDKERHDRKDRRDRNKDNKRD
DSKRRGRDRGLGNRGGSDKGLEKPNKPMERLLPRPEERLAALAAISNRNLETDKNSTTSK
DRQDTQSERGGRKQERAEKERSTKRDRMDSLDRDQGDYEMGIDRQYDNDHNIDHYERGDD
RYDNIPREDDRSPGYGRERHYDAGYDMAGPPRGYPEDEDRMYGEHIGDHRGVDMGYDERH
PRRDRSWDRSASIDRERGYMHPHKDWDNEDYRAAGDWGRDRHWPMHEQMNEWGDKDPEME
GWHHRGHPGPGSHRGRGHDDYNRMRMDMGRGDGKRRMARNEPPEAAVKHTPPPAQTAAAP
ARTDTDVEDKPIPDDLSEISDDPDDILERDDMGDHNNDEDSQTAPPADESTSKVEGSEKE
STQDTSGAGEDKELQEVKDEEDVTNLDFEEISDGELEEERTRAGLGDALGVDWASLVADV
HRREHTVPTGGARDRWKPERVLSRLGLSLDMAGKDVVEKILHKNADTLAEAKSGETNSKE
NAEGKPIENGEQKEEKKAEPPPDVNSLHPVAAIQVAIQKRKRQRALLFGSGCEITRGLSA
RRDLALRRYLCNLPPAERTGQSRVAPQPSLFHAARALLMQAPANG
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagcagggaaaaagaaaaataactgttgagcttcctaaaacgaaagatctatct
aatagacctagtgtttttgaacgtctcggaaccaagaaaaattctagtgcaaaaaaaaca
actgaacattgcaggcagtgggctcagcacgggagttgcgtttacggtaaaagttgtaaa
tttgcgtccacgcacacattaataagtccgtcgaagcagcgtgctgctaataataataag
gacactgagcaaaaacgtttgcttaaggatgacggcaaaagtagactgcattcgaccgtg
gttgtaaagtcaggacgtagccccgatggcgaaattgacaactgggaccaaaatgactta
gagtatgcggatacagacgttctcgagaagcgtaggcaacaattgcagcgagaattagag
ttgcagttaaaaatggactctggaaaggacatgcgaaaagataagaagaaacccgtgtca
agtacgtcatcatctaggagttccagttcttccagcgtttcttcatcatcatctgatggc
agctcatcttcctcatcttcaggaagggatgcaaggagaaaaattaaaaaaagcaagtta
aagagaaactccagttcatcttcagatggagagccatccaaaaagaagtttgttaaaagt
gatcagctgaaaagggacaagagtgttactaagaaaactccagtgaaaaaggaagacaga
cttttgaagaaacatgacattgttaagaagaaacctgctactaaagcacctattggtaag
aagtctctgtcaccaggcaagaaatcaggaggaactcctccaataacctcaaagagtctc
tctaaaattgggactaaacatggaaagtctccactaaggagaaaaagtgcatctccgcat
tctactagagatagggataaggatcgcaataaggagaaagaaagagataaggaccgtgat
aaagaaagggaacgtaccagaggtcgaagtaggtcaccaagaaaagcacggtccagatca
ccacgtaaagatcagaaaaagaaagagagttctgaaagaagccgcccagtttcacctaaa
aaaccagtcaggagagatggcagtactgagagacatagaaaacgttcagcaagcagggac
cgtgacagagggagagaccataaagacagatctatagagagaagaaaggataagcatgat
gataaagaaaggcacgatagaaaagatagaagggacaggaataaggacaacaagagagat
gatagtaagcgaaggggacgtgatcgaggtttaggtaacaggggtggatctgacaaaggt
ttagaaaagccaaataaacctatggaaagattgctgcctagacctgaagagcgtttggcg
gcccttgctgctatctccaacagaaatctcgaaactgacaaaaattcaacaacttctaaa
gataggcaagatacacagtctgagaggggtgggcgcaaacaggaaagggcggaaaaagag
cgttctactaagagagatagaatggatagtttggacagggatcaaggtgattatgaaatg
ggtatagatcgtcagtatgacaatgaccataacatagatcattatgaaagaggtgatgac
agatatgataatattcctagagaagatgataggtcaccaggttatggtagagaaaggcac
tatgatgctggctatgacatggcaggcccacctagaggttatcccgaggatgaagacagg
atgtatggagaacacattggtgatcatagaggtgttgacatgggttatgatgaacgccat
cctagacgggatcgttcttgggatcgatctgcttctatcgatcgggagcgtgggtacatg
catccacacaaagactgggataatgaagactaccgcgctgctggggactggggtagagac
agacattggcccatgcatgaacagatgaacgagtggggtgacaaagaccctgaaatggaa
ggttggcatcatcgcggccacccagggcctgggtctcatcggggccgtggacatgatgac
tataacagaatgagaatggacatgggcaggggtgacggtaaaaggcgaatggctagaaat
gaaccgcctgaagccgcggtgaaacacacgccgccgccagcgcagacagccgctgccccc
gccagaactgataccgatgtggaagacaaacccatacctgatgatctcagcgaaatcagt
gatgatcctgatgatatacttgaaagagatgacatgggcgatcacaataatgacgaagat
agccaaacagcgccgccagcggatgaaagtacttccaaagtagaaggttctgaaaaagaa
tctactcaggatacaagtggcgctggcgaggataaggaactgcaggaagtcaaagatgag
gaagatgttacaaacctagattttgaagaaatttctgatggagaactggaagaagagcga
actcgagctggtctaggcgacgctttaggtgtcgattgggcaagtctggtagctgatgtg
cataggcgggaacacacggtgccgacaggcggcgcaagagatcggtggaagccggaaaga
gttctatcaaggctcggcttgtcacttgatatggctggcaaagatgttgtagagaaaata
ttacataagaatgccgacactcttgctgaagcaaaatctggagaaacaaattcaaaagaa
aatgctgaaggaaaaccgattgaaaatggagaacagaaggaagaaaagaaagcagaacca
ccacctgatgtcaattcattgcatccagtggctgctatacaggtcgccattcaaaagagg
aagaggcaacgtgcactgctattcggctctggctgtgaaattacgcgcggtttgagcgct
agacgcgatttagcgctccgacggtatctctgtaacctgccgccggcggaacgcacgggg
caatcccgtgtggcgccacaaccttctttgttccacgctgcacgagcactactaatgcaa
gccccagccaatggctga
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