Amyelois transitella (navel orangeworm): 106129103
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Entry
106129103 CDS
T09957
Name
(RefSeq) sorting nexin-27
KO
K17936
sorting nexin-27
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atra04131
]
106129103
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
atra04990
]
106129103
Membrane trafficking [BR:
atra04131
]
Protein recycling
Others
Others
106129103
Domain-containing proteins not elsewhere classified [BR:
atra04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
106129103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
PDZ_6
RA
SNX17-27-31_F1_FERM
RA_2
PDZ_2
SNX17-31_F2_FERM
Sina_TRAF
FERM_N
Motif
Other DBs
NCBI-GeneID:
106129103
NCBI-ProteinID:
XP_060804451
LinkDB
All DBs
Position
16:complement(join(10165112..10165180,10165472..10165650,10166110..10166299,10167502..10167662,10167994..10168240,10169714..10169811,10170929..10171202,10171795..10171897,10179074..10179342))
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AA seq
529 aa
AA seq
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MAETETENNSIIRSVRNNKGIVANSGPRRVTIYKTETGFGFNVRGQVSEGGQLRSINGEL
YAPLQHVSAVLEQGAAEQAGIRKGDRILEVNGVNVEGSTHRQVVDLIKSGGDCLTLTVIS
VTQREAERLEPCDDGSAPVGVIGGAANSRATVYQRYDYTDKRSLPVSIPDYRVVMERNTG
RSYVAFNVHMAGRHLCSRRYREFAALHQQLRKEFLGFNFPKLPGKWPFNLSEQQLDARRR
GLEQYLEKVCAVRVIAESDAVQEFLTDSDDASNPTPVELKVLLPDKEVVTVSVLKSTNAD
DVYRAVCDKISLPKHVQDYFYLFEIQEYNFERKLQPNECPHSLYIQNYSTASSSCLSIRK
WLFNPHREIRVCEDSKALAFIFWQAVEDVNRGVCVAGERLYQLVALQHVRRAAQYLRLAR
ALPGYGALAFPPAGTDCADMPAAALTVGWAGVQLSPCSASPAADEARGVRVRWAAVARWA
ADDEAAALRLTYTHHDVERSIVLYTPYYQFLCNCMDRIAEEATWPDTGD
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggctgagacagaaaccgaaaataacagtattattagatccgtaaggaacaataaaggg
atagtggctaacagtggtccccgtcgagttactatctataaaaccgagacaggtttcggt
tttaacgtgcgcggtcaagtgtctgaaggtgggcagttgagatcgatcaacggagagttg
tatgctcctcttcagcacgtcagcgctgtcctagaacaaggagcggctgaacaggccggg
ataaggaagggggacagaattcttgaagtaaacggcgttaacgtcgaaggctcaactcac
aggcaggtggtcgacttgatcaagtctggcggagactgtctcactctgactgttatatct
gtcactcaaagggaagcggaacgcctggaaccttgcgacgatggctcagccccagtggga
gtcatcggcggcgccgccaactcacgtgcgacagtctaccagcgatacgattacaccgac
aagcgatcattgcccgtgtccataccagattaccgggtggtcatggagaggaacacgggc
cgctcgtacgtggcgttcaatgtacacatggccgggcggcatctgtgcagtcgacgctat
agggagttcgcggcgctacatcaacagttgaggaaggagtttcttggattcaacttcccg
aaactgcccgggaaatggccgttcaacttgagcgagcaacagctggacgctaggcggaga
ggacttgaacagtatttagagaaagtgtgcgcagtccgagtgatagcggagtcggacgct
gtccaagagttcctcactgactctgatgacgcctccaacccaacgccggtggagctgaag
gtcctgcttcccgacaaggaggtggtcaccgtctcagtgctcaagtccacgaacgccgac
gacgtgtacagagccgtgtgcgacaagatctcgttgccgaaacacgttcaggactatttc
tatctgttcgagatacaagagtataactttgaacgcaaactccaaccgaacgagtgccct
cattccctttacatccagaactattccacagcgtccagcagttgcttgtccattagaaaa
tggctgttcaatcctcacagggagatcagggtctgcgaagacagcaaggctttagctttt
attttctggcaggcagtcgaggacgtgaaccggggcgtgtgcgtggcgggcgagcggctg
taccagctggtggcgctgcagcacgtgcgccgcgccgcgcagtacctgcggctggcgcgc
gcgctgcccggctacggcgcgctggccttcccgcccgccggcaccgactgcgcggacatg
cccgccgccgcgctcactgtcggctgggcgggcgtccagctgtcgccgtgcagcgccagc
cccgcggcggacgaggcgcggggggtgcgcgtgcgctgggcggcggtggcgcgctgggcg
gccgacgacgaggcggccgcgctgcgcctcacctacacccaccacgacgtcgagaggtcc
atcgtgctgtacacgccctattaccagttcctttgcaattgtatggatcgaatagcggag
gaggcgacgtggcccgacaccggcgattaa
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