Amyelois transitella (navel orangeworm): 106129138
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Entry
106129138 CDS
T09957
Name
(RefSeq) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
atra
Amyelois transitella (navel orangeworm)
Pathway
atra03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106129138
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atra03000
]
106129138
03021 Transcription machinery [BR:
atra03021
]
106129138
Transcription factors [BR:
atra03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
106129138
Transcription machinery [BR:
atra03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
106129138
RNA polymerase III system
TFIIIB
106129138
RNA polymerase I system
SL1/TIF-1B
106129138
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-GeneID:
106129138
NCBI-ProteinID:
XP_013183064
LinkDB
All DBs
Position
14:complement(join(644040..644315,645682..645925,647441..647571,647705..647950))
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AA seq
298 aa
AA seq
DB search
MDQMLPSPYNIPGIGTPLHQPEEDQQILPNALQQQHQQQSLAAMGSSPLVGFGGSLMGTP
QRLHTYAPTFSTPQQMMQPQTPQNLMSPMITGGSLAGQPLLSQASPAPMTPMTPHSADPG
IVPQLQNIVSTVNLNCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV
CTGAKSEEDSRLAARKYARIIQKLGFTAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHGQF
SSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRQEIYEAFDNIYPILKSFKKQ
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggatcagatgcttccaagtccgtataatataccggggatcgggacccctcttcatcag
cccgaagaagaccagcagatattgccaaatgccttgcaacagcagcatcaacaacagtcc
ttggcggcaatgggatcctcgcctctcgttggcttcggaggatctttgatgggaactcct
cagaggctccatacctacgctcctacattctctactcctcaacaaatgatgcagccacaa
acacctcaaaatctcatgtcaccaatgataactgggggtagtttagccgggcagcctctc
ctcagccaggcgagtcctgctccgatgacccccatgactccacattcagctgatcctgga
atagtgccgcagttacaaaacatcgtctcaactgtcaatttaaattgtaagctggatttg
aagaagattgcgttacatgcccgtaacgcagaatataatcccaaacggtttgccgctgtc
atcatgagaatacgagagcccaggacgacggcgctcattttctcatcgggcaaaatggtg
tgcacgggagccaagagtgaggaggattcgagattagctgcgcggaagtacgctaggata
atacagaagttgggtttcactgcaaagttcttagatttcaaaatacaaaacatggtggga
agttgcgacgtgaagtttccaattcgattggaaggcttggtcctcacccacggccagttc
agttcctacgagccggaattgttcccaggactcatttaccgaatggtgaagcccagaata
gtgcttttaatattcgtatcgggcaaagtagtgttgactggtgctaaagtgagacaagaa
atatacgaagccttcgataatatctacccaatactaaagagtttcaagaaacagtga
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