KEGG   Amyelois transitella (navel orangeworm): 106129162
Entry
106129162         CDS       T09957                                 
Name
(RefSeq) splicing factor U2af 38 kDa subunit
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
atra  Amyelois transitella (navel orangeworm)
Pathway
atra03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:atra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106129162
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:atra03041]
    106129162
Spliceosome [BR:atra03041]
 Complex A
  U2 snRNP components
   U2 related factors
    106129162
 Complex B
    106129162
SSDB
Motif
Pfam: zf-CCCH RRM_1 Torus zf_CCCH_4 Nup35_RRM_2 PAPS_reduct
Other DBs
NCBI-GeneID: 106129162
NCBI-ProteinID: XP_013183098
LinkDB
Position
14:join(927492..927535,927770..927924,928277..928434,928717..928916,929338..929473)
AA seq 230 aa
MAEYLAAIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAK
SADGSHLVVANVSDEEMQEHYDNFFEDVFVESEDKYGEIEEMNVCDNLGDHLVGNVYIKF
RREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPI
SRELRRYLYSRRSKGGRRSRSRSRDKRRRSRSRERRRAPDAPRNSRAGRY
NT seq 693 nt   +upstreamnt  +downstreamnt
atggccgagtatttggcggctatattcggcacagaaaaggataaagtaaactgctccttc
tatttcaaaatcggtgcctgtcgccacggagatcgctgctcgcgtatccataacaaacct
acgttctcacagaccgtcttactacaaaatttatatgtgaatccacaaaactcagctaaa
tctgcagatggtagccatttggtcgtagccaatgtatctgatgaggagatgcaggagcat
tatgataacttcttcgaagatgtctttgtggaaagtgaagacaaatatggtgagatagag
gaaatgaatgtttgcgacaacctcggagatcatttggttggcaacgtgtatataaagttc
cgtcgtgaagaagatgctgagaaggcagtgaacgacctcaacaaccgttggtttggcgga
cgcccagtctacgctgagctgtctcccgtcacggacttccgtgaggcttgctgccgtcag
tacgagatgggggagtgtactcgcagtggcttctgcaactttatgcacctcaagcctatc
tccagggagttgaggagatacctgtactcgcggcgcagcaagggcgggcggcgctcgcgc
tcgcgctcgcgggacaagcggcgccgctcccgctcgcgcgagcgacgccgcgcgcccgac
gcgccgcgcaactcccgcgccggccgctactag

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