Amyelois transitella (navel orangeworm): 106129316
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Entry
106129316 CDS
T09957
Name
(RefSeq) uncharacterized protein LOC106129316
KO
K10886
DNA-repair protein XRCC4
Organism
atra
Amyelois transitella (navel orangeworm)
Pathway
atra03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
106129316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atra03400
]
106129316
DNA repair and recombination proteins [BR:
atra03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
106129316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRCC4
XRCC4_CC
Arm-DNA-bind_2
Cupin_3
DUF7438
Motif
Other DBs
NCBI-GeneID:
106129316
NCBI-ProteinID:
XP_013183300
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All DBs
Position
18:complement(7516189..7516818)
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AA seq
209 aa
AA seq
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MTENTSTIPASRLTVSKVDVKSGCIYIKLLWEQDPNELFRIHIFESDNRSWSGSFTYENA
RQCRESFDIEDENQYKMSVKEALIGVSDCYVFDFDVNKGEFRWKKKFPDSAVVEHGRVTV
HKDDVPTSIHTLVDILLEQNQSLLNIIQEYSKNHMGLEAELDLCKHELDNFIDTKISLEE
TMYGKFLQLLNEKKRRITMLDEAIKSMDS
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaaacacatctacaattccggcaagtcgtctcaccgtatccaaagttgatgta
aaaagtggatgtatttatataaagttgttatgggagcaggaccctaatgaattatttaga
attcatatatttgaaagcgataacagaagttggtcaggcagttttacttatgaaaatgct
agacagtgtagagaatcatttgatattgaagacgaaaatcagtacaaaatgagcgtcaag
gaagccctgattggtgtcagtgattgctatgtttttgatttcgatgttaacaaaggtgaa
tttagatggaaaaagaaattccctgattctgctgttgttgaacatggtagagtgactgta
cataaggatgatgtaccaacttccatacatacattggtagatattctactggaacaaaac
cagtctctcctcaatattattcaagaatacagcaagaatcacatgggtctcgaagctgaa
ttagatctatgtaaacatgaactggacaattttattgacactaaaatatcattagaagag
acaatgtatgggaaatttttgcaattattaaatgaaaagaaacggagaataacaatgctt
gatgaagcaatcaagtcaatggacagttga
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