KEGG   Amyelois transitella (navel orangeworm): 106129468
Entry
106129468         CDS       T09957                                 
Name
(RefSeq) cyclin-T-like isoform X1
  KO
K15188  cyclin T
Organism
atra  Amyelois transitella (navel orangeworm)
Pathway
atra03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:atra00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    106129468
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:atra03021]
    106129468
Transcription machinery [BR:atra03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     106129468
    Brd4/P-TEFb complex
     106129468
    7SK RNP complex
     106129468
SSDB
Motif
Pfam: CycT2-like_C Cyclin_N TFIIB
Other DBs
NCBI-GeneID: 106129468
NCBI-ProteinID: XP_060808680
LinkDB
Position
29:join(3511747..3511895,3516721..3516838,3517634..3517741,3518051..3518159,3519918..3520054,3520279..3520435,3520825..3520932,3522037..3522226,3523104..3524418)
AA seq 796 aa
MAGGQEKWYFTKEQLVNSPSKKCGLDADKELAYRQQAANLIQDMGQRLQVSQLCINTAIV
YMHRFYAFHSFTQFHRNAIAAASLFLAAKVEEQPRKLEYVIKVAHVCLHRGESVNALQPE
QYTEQAQDLVFNENVLLQTLGFDVAIDHPHTHVVRTCHLVKAPKDLAQTSYFMASNSLHL
TTMCLQYRPTVVACFCIHLASKWSNWAIPQSHEGRHWFSYVDRTVTSDLLEKLTAEFLLI
FEKCPSRLKRKMMSMSNTPSGSPHSHAPHPGSSGGADKKHPQPISEEFDKSAFDKEYERE
RRRQPAPGGYVPATAPQPTSQPQPQKIDYNLYREKREREERERREERERERQRQMQQQRA
GQPPRGAPPPARPAAPAHKPAPWPHAKPHHKPHEPRPRPPPAEPPRTRPPSLFSPESAVT
PLAAAAAPRRPHPPPPRPREAPARPPHPPHAQPQAERPPSPRKRPDPNLAIREMQPPAIL
SPFASPQSSREAQNKQDHHTQKARSRLPSASEPELVPVVKKIEETPGYENVLRDSQRGSV
RAKQPERVKADVATDSRQEPRALNGIETDPTLVSNLLKESLAKPAPITVATERKSPQVEI
KKEPEVPPPPPPAEAPAAQPTESEHKHKKEKKKKEKHKHKDRDKSKEERKKHKKDKKRDS
PPPAAPETEAHMKLTVQTDAPSGLKIKIPKDRLAVPPPPPQTGLKIKISKEVLETSKQKR
SHPSSAPGPPPKLARHNGAPHKVTWRPPPPLPYYMVQPPPVFFGVVDGYFYPPMYPPPQP
PLPDVPPPPVPPPPPE
NT seq 2391 nt   +upstreamnt  +downstreamnt
atggctggaggacaagagaaatggtattttaccaaagagcagctggtaaattctccaagc
aagaaatgcggtttagatgcagataaggaactagcatataggcaacaggccgcaaaccta
atccaggatatgggccagcggctacaagtatcacaattatgtatcaacacggcgatagtg
tacatgcacaggttttatgcgttccactcgttcacacagttccacagaaatgccatagcc
gccgcttcgctattcctcgccgcgaaggtggaggaacagcccaggaaattagaatatgta
ataaaagtagcacacgtatgtctccacagaggtgagagtgtgaacgccctgcagccggaa
cagtatactgaacaggcgcaggacctggtattcaacgagaacgtactactacaaacgcta
ggtttcgatgtcgcgatcgaccacccacacacgcacgtcgtacgcacatgtcaccttgtc
aaagcaccgaaagacctggcgcagacctcgtatttcatggcctccaacagtctccacctc
accaccatgtgtctgcaataccgcccgacggtggtcgcgtgtttctgtatacacttggcg
tccaaatggagtaattgggcgataccacaatcgcatgagggccgccactggttctcatat
gtggacaggactgtgaccagcgacctattggagaaactcaccgccgagtttctgctgatc
tttgagaaatgtccgtctcggctcaagaggaagatgatgtccatgtccaacactcccagc
ggttccccgcactcgcacgcgccgcacccgggttcctcgggcggcgcggacaagaagcac
ccgcagccgatcagcgaggagtttgacaagtcagccttcgataaggaatacgaacgcgag
cgacgtcgccagccagcgccgggcggctacgttccggctacagcgccacagcccactagc
cagccgcaaccacagaagatagactacaacctttacagggagaagagggagagggaagag
cgggagaggagagaagagagggagagggagaggcagagacagatgcagcagcagagagcg
gggcagcccccgcgcggcgcgccgccccccgcgcggcccgcggcgcccgcgcacaagccg
gcgccgtggccgcacgccaagccgcaccacaagccgcacgagccccgcccgcgcccgccg
cccgccgagccgccgcgcacgcgcccgccctcgctgttctcgcccgagagcgccgtcacg
ccgctggccgccgccgccgccccgcggaggccccacccgccgccgccgcgccccagggag
gcccccgcccggccgccgcacccaccgcacgcccagccccaggccgagagaccgcccagt
cccaggaagagaccggaccccaatctcgcgatcagagaaatgcaaccgcccgccatcctc
tcgcccttcgcctccccgcaaagcagtagggaggctcagaacaaacaggatcatcacacc
cagaaagccaggagccggttgccgtccgcctccgagccggaactggtgccggtcgtgaag
aaaatcgaggaaacgcccggctacgagaacgttttgagagattcccagagagggtcggtc
agggcgaaacagccggagcgagtcaaagccgacgttgcgacggattcgagacaagaaccg
agagctctgaacggcatcgaaacggatcccactttagtttctaatctacttaaagagagt
ttagcaaaaccggcccctattactgtggcgacggaaaggaaatcgccgcaagtggaaatc
aagaaggaaccggaagttcctccaccgccgccgcccgcggaggcgccggcggcccaaccc
acagagtccgagcacaaacacaaaaaggagaagaagaagaaggagaaacacaaacacaaa
gaccgcgacaagtcgaaagaggagcggaagaaacacaagaaggacaagaaacgcgactcc
ccaccgccggccgctccggaaacggaagcgcatatgaaactaacagttcaaacggacgca
ccgtccggcttgaagataaaaatacccaaagatcgattggcggtgccgccgcctcccccg
cagaccggactaaagattaagatatccaaagaagtgctggagacgtccaagcagaagcgg
agccacccgtcgtcggcgccgggccccccgccgaagctggcgcgccacaacggagccccc
cacaaggtaacctggcggccgccgccccccctgccgtattacatggtgcagccgccgccc
gtcttcttcggagtcgtggacggctacttctacccgcccatgtacccgccgccgcagccc
ccgctgcccgacgtgcccccgccgccggtgccgccaccgccgcccgagtaa

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