Amyelois transitella (navel orangeworm): 106129497
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Entry
106129497 CDS
T09957
Name
(RefSeq) probable nuclear hormone receptor HR3
KO
K14033
nuclear receptor subfamily 1 group F member 4
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atra03000
]
106129497
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
atra03310
]
106129497
Transcription factors [BR:
atra03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
106129497
Nuclear receptors [BR:
atra03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
106129497
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
106129497
NCBI-ProteinID:
XP_013183529
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All DBs
Position
29:complement(join(2339066..2339195,2339608..2339758,2340117..2340235,2341185..2341293,2342067..2342221,2342985..2343099,2346304..2346497,2347767..2347935,2355696..2355809,2357267..2357380,2369447..2369738))
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AA seq
553 aa
AA seq
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MNNQFHELFGSQWPPDQHGGHSSASTMLHQSQSSMPQLQLKREPHTDVQGVMHNQMGMDI
SGSVADSTSPPPGSSDGMFGSSITGMFMDKKAANSIRAQIEIIPCKVCGDKSSGVHYGVI
TCEGCKGFFRRSQSTVVNYQCPRNKACVVDRVNRNRCQYCRLQKCLKLGMSRDAVKFGRM
SKKQREKVEDEVRFHRAQLRAQTDAAPDSVYDAQQQTPSSSDQFHNHYNGYTGYNSPISS
YGYNAGPALTSNITGIQTQGPQPQGYDAGADYVDSTTYEPKPTSGFLDPDFIGHGEGDIS
KVLVKSLAEAHANTNPKLEFIHEMFRKPPDVSKLLYFNSMTYEEMWLDCADKLTGMIQNI
IEFAKLIPGFMKLTQDDQILLLKSGSFELAIVRLSRLIDVNRDQVLYGDVVLPIRECVHA
RDPRDMQLVVGIFEAAKTIARLKLTETELALYQSLVLLWPERHGVRGNHEIQCLFNMSMA
AIRHEIESNHAPLKGDVTVLDTLLAKIPNFRELSLMHLEALCRFKAAHPNHVFPALYKEL
FSLDSVLDPYTHG
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatcaattccacgagctgtttggatcccagtggcctccagaccagcatgggggt
cactcgtccgcgtctaccatgctgcatcagtctcagtcttcgatgcctcagctgcagttg
aaacgggagccccatactgacgtccagggggtgatgcacaaccaaatggggatggacatc
tcggggtctgttgccgacagcacctccccaccccctggaagcagcgacggcatgttcggt
tcctcaattactggcatgttcatggataaaaaggcagcgaactcgataagagctcaaatc
gaaattataccatgcaaagtctgcggagacaagtcatcaggggtccactatggcgtcatc
acgtgcgaaggctgcaagggattcttcaggaggtcccagagtacagtggtgaactaccag
tgcccgcggaacaaagcgtgcgtggtagacagagtcaaccgcaacaggtgtcagtactgt
cggctgcagaaatgtctcaaacttgggatgagtcgggatgcggtgaaattcgggcgaatg
tcgaagaaacaacgtgagaaggttgaggatgaggtgcgatttcatcgggcacaattgaga
gcacagacggacgccgcgccagactccgtgtacgacgcccaacagcagacgcctagttca
agcgatcaattccacaaccattacaatggttacaccggctacaactccccaatctcctcc
tacggctacaacgcgggcccggccctcacgtccaacatcacgggcatacagacccagggc
ccgcaaccacaaggctacgacgccggcgccgactacgtcgactccaccacgtacgagccg
aagcctacgagtggattcttggatccagatttcattggccatggtgaaggtgacataagc
aaggtgctggtgaagagtttggccgaagcccacgccaacaccaaccccaagctggagttc
atacacgagatgttcagaaaaccaccagatgtctccaaattactgtacttcaactcgatg
acgtacgaggagatgtggctggactgcgcggacaaactgacaggaatgattcagaacatc
atagagttcgcgaaactcatccctgggttcatgaaactgacgcaggacgaccagattctg
ctgttgaagtcaggttcgttcgagctggccatagtccgcctttcgaggctgatcgacgtg
aaccgcgaccaggtgctgtacggcgacgtggtgctgcctatcagggagtgcgtacacgca
cgtgacccacgcgacatgcagctggtggtggggatcttcgaggccgcgaagaccatagcg
agacttaaactgactgagactgaactggcgctgtaccagagcctcgtgttgttgtggcca
gaacgacacggcgtccgaggcaaccacgagatccaatgcctgttcaacatgtcgatggcg
gccattcgtcacgagatcgagagcaatcatgcgccgttgaagggcgacgtcacagtactg
gacactctcctcgccaagatacccaacttcagagaactatcgctgatgcacttggaggcg
ctctgccgcttcaaagcggcccatccaaaccatgtattcccagcgctatacaaagaacta
ttctccttagacagtgtcctggatccatacacccacggataa
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