Amyelois transitella (navel orangeworm): 106129624
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Entry
106129624 CDS
T09957
Name
(RefSeq) m7GpppN-mRNA hydrolase
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
atra
Amyelois transitella (navel orangeworm)
Pathway
atra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106129624
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atra03019
]
106129624
Enzymes [BR:
atra01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
106129624
Messenger RNA biogenesis [BR:
atra03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106129624
mRNA degradation factors
5'-3' decay
Decapping complex
106129624
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP2
NUDIX
Nudt16-like
NUDIX_4
Motif
Other DBs
NCBI-GeneID:
106129624
NCBI-ProteinID:
XP_013183679
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All DBs
Position
16:complement(join(7664736..7665443,7665956..7666174,7671065..7671227,7671369..7671439))
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AA seq
386 aa
AA seq
DB search
MASHGNHHPAKHSIPIDMLDDLCSRFIINLPQEDRGNLVRICFQIELAHWFYLDYYCTDE
SNRLNPCGIREFAAHIFQHVPHLREHISKLDEVLDNWREYKQTVPTYGAILLDTDLTHVL
LVQSFWTKASWGFPKGKVNEDEEPWKCAVREVLEETGFDISKLINKNDYIEATIHDQIVR
LYIIGFIPRDTKFQPRTRNEIKSCEWFALSDLPTNKKDMTPKLKMGVSPNAFFMVLPFVK
RMKRWVAERNPKVFNNSTKRTRHKSMGDIEASTSKNKTNQKSISQGLENEIKEFQQQNSA
GKYKNSGIQGSGAKNNNTYVNSNRKERKITKRQLFTPQNEQESNASPEQKGGSPDEVSDY
DHFFSFVAPSWANFKFDQRAILDCLT
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggcatcacacggcaaccatcatcccgctaagcattctatacctattgatatgttagat
gacctgtgtagccgttttataataaatctaccgcaagaagatcgaggcaatttagtccgt
atatgttttcaaattgaattggcccactggttctacttagattattactgcacagacgaa
tcaaaccggctgaacccatgtgggataagagagtttgctgctcacatatttcagcatgtt
ccccatctgcgtgagcacattagtaaacttgatgaagttcttgacaactggagagaatac
aaacaaacggtacctacatatggagccatacttttagatacagacttgacacatgtgcta
cttgtacagtctttctggacgaaagcctcatgggggttcccgaaaggcaaggtaaatgaa
gatgaagagccttggaaatgcgctgttagagaggtactagaagaaacgggttttgatata
agcaagttgattaacaagaatgactatattgaggcgacgattcacgatcaaatcgtgcga
ctgtacattataggttttataccaagggataccaaattccagcctagaacaaggaatgaa
atcaaatcctgtgaatggtttgcactgtctgacctacccaccaataaaaaggacatgacg
cccaagttgaaaatgggtgttagcccaaatgcattttttatggtattaccattcgttaaa
cgcatgaaaagatgggtagctgaacgcaatccgaaagttttcaataatagtacaaaacgc
actagacacaagtctatgggggatatagaagcttcaacgagcaagaataagacaaatcaa
aaatcgatttctcaaggattagagaatgagattaaagaattccagcagcagaattctgca
gggaagtacaagaatagcggaatccagggtagtggtgctaagaacaataatacatatgta
aatagtaacaggaaagagaggaaaataactaaaaggcagttgtttactcctcagaatgag
caagagagtaatgcgtcgccagaacaaaagggtgggagcccagatgaagtaagtgattat
gatcacttcttcagctttgtggccccatcgtgggccaattttaagtttgaccaacgagca
atcttagattgcctcacttga
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