Amyelois transitella (navel orangeworm): 106129637
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Entry
106129637 CDS
T09957
Name
(RefSeq) syntaxin-18
KO
K08492
syntaxin 18
Organism
atra
Amyelois transitella (navel orangeworm)
Pathway
atra04130
SNARE interactions in vesicular transport
atra04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
106129637
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
106129637
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atra04131
]
106129637
Membrane trafficking [BR:
atra04131
]
SNARE
Syntaxin (Qa)
Stx-rER
106129637
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin-18_N
SNARE
COG6_N
Motif
Other DBs
NCBI-GeneID:
106129637
NCBI-ProteinID:
XP_013183695
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All DBs
Position
16:join(7672475..7673257,7673727..7673915)
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AA seq
323 aa
AA seq
DB search
MDITPLFRACIKTVKTRNKAFGIQSPSNEDRQRLLRSKPKSPFITTAKEITLQITKLRDF
LLEHRERYLSFFNNVTGDEMPDVERDQIDTGAQRIINTCSHLLKEFRNDNRKATASPQIR
DFMDAVIDLVDIYLKAVCKIHSELKALRVKRALDIRKLSRLELPQTKSNIPNPFMPDKII
EKEVEVVENEETDGVKKKMDLSENDVAVMSDEGQLSAEELQMFESENVQLLNELNSMTEE
VRQIETKVLHIAELQEIFTEKVLQQEHDIDRISNTVVGATENVKDANEQIKQAIQRNAGL
RVYILFFLLVMSFTLLFLDWYNE
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggatataacacctctgtttagagcatgtataaaaaccgtgaaaacgcgcaataaagct
tttggaatacaaagtccttccaacgaagataggcagcgtttgttaaggagcaagcccaag
agtccctttatcactactgctaaagaaataacattacagattacaaagttgcgtgacttt
cttctggaacatagggagcggtatctgagttttttcaataatgttactggagatgaaatg
ccagacgttgaacgtgatcagatcgatacaggagcccaaagaataataaacacatgttct
catttgcttaaagagtttagaaatgacaaccgcaaggcaactgcttcaccacagattcga
gactttatggatgcagtaatagatcttgtggacatctacttaaaggcagtatgcaaaata
cacagtgaattaaaggccttgagagtcaagcgagccttggatattcgaaaactatcccgt
ctggagttgccacagactaaatctaatattccaaatccttttatgcctgataaaatcatt
gaaaaggaggtggaagtggttgagaatgaagaaactgatggtgttaagaagaagatggat
ttgtctgagaatgatgtagcggtgatgtctgatgaagggcagttgagtgcagaagagtta
cagatgtttgagtcagaaaatgttcagttgctgaatgagctcaatagcatgacggaggag
gtccggcaaatcgaaactaaagtgcttcatattgccgagctgcaggagatcttcacagag
aaggttcttcagcaagagcatgatatagaccggatatcaaatactgtggtgggggccacg
gagaatgtgaaggatgccaatgaacaaattaaacaggccatccagaggaatgctggtcta
agagtttacatactcttctttttgctagtgatgtcattcactttgctgttcttagattgg
tataatgaataa
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