Amyelois transitella (navel orangeworm): 106129655
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Entry
106129655 CDS
T09957
Name
(RefSeq) survival motor neuron protein isoform X1
KO
K13129
survival motor neuron protein
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atra03041
]
106129655
Spliceosome [BR:
atra03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
106129655
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Gene cluster
GFIT
Motif
Pfam:
SMN_YG-box
SMN_G2-BD
SMN_Tudor
YebG
SCAI
Motif
Other DBs
NCBI-GeneID:
106129655
NCBI-ProteinID:
XP_013183717
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All DBs
Position
16:join(8133947..8133988,8134184..8134331,8135008..8135184,8135771..8135959,8136268..8136380,8137190..8137338,8138098..8138125)
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AA seq
281 aa
AA seq
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MSLRDVLYVKERNNSDGEDEEGDEDIWDDRKLNDAYDKALKMANAEVAKRIAMATNSQSK
IKSGSSPSKKAKESKSNTHNQKKNVNFLPDTPCRAIYEEDGQEYEATVLYPCNTNSTFVK
FVGYNNVEAVPNRLLKPSLGEEARAKQMEEALALDEQSNSHMSRSSQAGSLTGNSEQGEE
VTRDTDASSKGSKAPKKKKQPKNKKLYRPEMPFPIPDLSTLMSTGFEDMPLPPPPPVAFP
CSSKDSEEQIMSSMLITWYMSGYYAGLYQGLKRSKENGKKK
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgtctctacgtgatgtattgtacgtcaaagaaaggaataactctgatggggaagacgaa
gaaggcgacgaggacatttgggatgatcggaaactcaacgacgcttacgacaaagcctta
aaaatggcaaatgctgaagtcgccaaacgcattgctatggccacaaattctcaaagtaaa
atcaaatcaggaagctccccaagtaaaaaagcaaaggagtccaagtctaatactcacaat
cagaaaaagaatgtaaattttttgcctgacactccatgccgagctatctatgaggaggac
ggccaagagtatgaagctaccgtgctgtatccttgtaataccaattccacttttgtaaaa
tttgtaggttacaataatgtagaagctgtgccaaaccgtttactaaagccttcactcggt
gaagaggctcgggctaagcaaatggaggaagctttggctttagacgagcaatccaatagc
cacatgagtcggtcttcgcaggcgggaagccttacaggaaacagtgagcaaggagaggaa
gttaccagggacacagacgcatccagcaaaggctcaaaagctccaaaaaagaaaaagcag
cccaaaaacaagaaactatatcggccagaaatgccgttcccaattcccgacttgtctacg
ttaatgtccacgggctttgaggacatgccgctgcccccaccacctccagtggcgttccct
tgttccagtaaggattcagaggagcaaataatgtcgtcaatgttgatcacctggtacatg
agtggatattatgcgggattgtaccaaggactcaaaagatccaaggaaaatggaaagaaa
aaatag
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