KEGG T09957: 106129686

Amyelois transitella (navel orangeworm): 106129686

Entry

106129686         CDS       T09957

Name

(RefSeq) RNA polymerase II elongation factor ELL

K15183

RNA polymerase II elongation factor ELL

Organism

atra Amyelois transitella (navel orangeworm)

Pathway

atra03250

Viral life cycle - HIV-1

Brite

KEGG Orthology (KO) [BR:atra00001]
09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    106129686
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:atra01009]
    106129686
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:atra03021]
    106129686
Protein phosphatases and associated proteins [BR:atra01009]
Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     106129686
Transcription machinery [BR:atra03021]
Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     106129686
    Little elongation complex (LEC)
     106129686

SSDB

Motif

Pfam:

ELL Occludin_ELL

Other DBs

NCBI-GeneID:

106129686

NCBI-ProteinID:

XP_013183779

LinkDB

Position

16:complement(join(5051459..5051506,5055040..5055177,5055616..5055787,5056376..5056469,5056732..5056848,5057972..5058204,5059851..5060007,5060083..5060153,5063223..5063384,5065250..5065435,5065709..5065860,5068412..5068507,5084084..5084131,5093417..5093551))

AA seq 602 aa
MAALPAGVQYGLSSESTNKENKELVFVKLTDSALKAIEDFIKNNKSKLGKPTIQFLPGNE
GKISIPSSNGNGPSGETTFHFSVLSNAEMEGPQGSFECVKTGGPRRLETCGPLPRRMRVL
ANDDSYEATKDRMAKTVAAEQSKCTRVIKPNQTDIGRRVKVRSSLYSGPNAAHIAERSDR
TERLDRSERLERPERSERIDRERIDRLERPERAERPAAAPPAARPQQQLPQLQPQQQQLQ
SQQSQQRAPSNPDLTKRSIKERVIQLLALKPYKKPELYARLNSEGIKERERGLVSKILPQ
ISTLKDNCYHLRRHIWNDVNEDWPFYTEEEKRTLKRRKPQNLTPPLSSDSANSLSPRASP
SANKRPSSAAADELPAKKQRISHYRRPSPPSSGYATTSSGERHASDNEDDRSTVKKDNGY
TLNFTTVKEICPSPVKANGFRNSPPVEQNNITVKDITNTEEPLDNTELTSAPDEKAIDMA
DIERQYPPVTSSQTRRAYKNEFTSLYKEYRSLYERVAAVAALFTRLEQQLRRAQPHSPDH
HSIEQRIHEEYRRINNDTLYQHERRRVEYLTRKLAHIKQMVQQYDDLRTLKPEHTSATTQ
AY

NT seq 1809 nt +upstreamnt +downstreamnt
atggcggccttgccagcaggtgttcagtatgggttatcatctgaatccacaaataaagaa
aataaggaactagtgtttgtgaaattaacggattcagcactgaaagctattgaagacttc
attaaaaataataagagcaaattgggcaaacctactatacagttcctaccaggaaatgaa
gggaaaatctcaataccatcatccaatggcaatggcccatcgggtgagactacgtttcac
tttagtgtccttagcaatgcagaaatggagggtccacagggttcgttcgagtgcgtcaaa
actgggggtccaaggcgtttggagacgtgcgggccactacccaggaggatgcgagtactg
gccaatgacgactcgtacgaggctacaaaagaccgtatggcgaagactgtcgcggcggag
cagagcaaatgcacccgcgtgataaagcctaaccagacggacatagggcgacgtgtcaaa
gtacgctcgtcgctttattcggggcccaacgcggcccatatagctgagcgctcggatagg
accgagcgattagatagaagcgagcgcttggaaaggcccgagcgctccgaacgtatagat
agagaaaggatagacaggttggaaaggcctgagcgggccgagaggccggcggcggcgccc
cccgcggctcgcccgcagcaacagttgccgcaactccagccgcagcagcaacagctgcag
tcacagcaatcacagcagcgggcgccctccaacccggatctcactaaacggtccattaaa
gaaagagtcatacaattactagcactgaaaccttacaagaagccagagttgtatgctaga
ttgaatagtgagggaattaaggaaagagaaaggggtctcgtgagcaagatcctgcctcaa
ataagcacactcaaggacaattgttatcacttacgtaggcacatatggaatgacgtcaat
gaggattggccgttctatacagaagaggaaaaacgcacactgaagaggcggaaacctcaa
aatctaacgccaccgctgagcagcgactctgcgaattcgctatcaccgcgcgcttcgccc
agcgccaacaagaggccgagcagcgccgctgcggacgagttgcccgccaagaagcagcgc
atatcacactacaggaggccatcgccgccctcgtctggttatgcgactacttcttctggc
gagcggcacgcgtctgacaatgaagatgataggtctacagttaaaaaggacaacggctac
acgctcaacttcaccacggtgaaggaaatctgcccaagtcctgtcaaagccaacggtttt
agaaatagtcccccagtagagcaaaataatatcacagttaaagacatcacaaatacagaa
gaaccattagataatactgaattaacgtcagcgcccgacgaaaaagcgattgatatggca
gacatagaaagacaataccctccagtcaccagctcgcagacgcggcgcgcgtacaagaac
gagttcacgtcgctgtacaaggagtaccgctcgctgtacgagcgcgtggcggcggtggcc
gcgctgttcacgcgcctcgagcagcagctgaggcgcgcccagccgcactcgcccgaccat
catagcatagagcaacgcatacatgaggaatacagacggatcaacaacgacaccctgtac
cagcacgagcggcggcgtgtggagtatctcacgcgcaaactcgcgcacatcaaacagatg
gtgcagcagtatgacgatctgcgcactctaaaaccggaacacacgtctgccactacgcag
gcgtactga

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