KEGG   Amyelois transitella (navel orangeworm): 106129772
Entry
106129772         CDS       T09957                                 
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein
  KO
K12842  U2-associated protein SR140
Organism
atra  Amyelois transitella (navel orangeworm)
Pathway
atra03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:atra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106129772
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:atra03041]
    106129772
Spliceosome [BR:atra03041]
 Complex A
  U2 snRNP components
   U2 related factors
    106129772
 Complex B
    106129772
SSDB
Motif
Pfam: Surp RRM_1 CID RRM_7 RRM_10 CTK3 UBA_7
Other DBs
NCBI-GeneID: 106129772
NCBI-ProteinID: XP_060803529
LinkDB
Position
3:complement(join(11120688..11120907,11121406..11121474,11122024..11122100,11123075..11123228,11123890..11124124,11125154..11125328,11128347..11128533,11130051..11130293,11131068..11131179,11131663..11131883,11132490..11132533,11133647..11133712,11134069..11134232,11134780..11134945,11135048..11135210,11135423..11135615,11136558..11136651,11137094..11137180))
AA seq 889 aa
MNYTMSARGLSKRELEELRKKEEEEAAAHVFKEFVETFQEVPTPTSKVWVKAGTYDAGAR
KEDTSERGKLYKPVSRLDEKRGVAEVDVVRSLAARPEPPGRPRAKQKGQDKKKSNLELFK
EELRQIQEERSERHKYKNVLRERGVVGVEPVVDVIPDVGSYDTGDPNTTNLYLGNLNPKI
TEQQLMEIFGRYGPLASIKIMWPRSDEEKARGRNCGFVAFMSRKDGERALARINGKEIMN
YEMKLGWGKAVVIPPVPIYIPPSLQQPHQPPPRSGLPFNAQPPKHLANKIPRVRPGEYYP
SDPEDKEVYEQILSQSIVKVVVPTERNILMLIHRMVEFVIREGPMFEAIIMNKEMNNPFF
RFLFENQSPAHVYYRWKLFSLLQGDSPKQWALDDFRMFKGGSVWRPPVMNLYTAGMPEEL
VEEDDAKDNIRGTLSNNQRDRLEELIRGLTASRQSVGAAMAWCLEHAEAAGEVARCLAES
LTGEHTGPHKRIARLYLLSDILHNAGAKLTNASAFRGAFQQRLVEIMRACHAAWARLESR
LQREGFRARVTRTLQAWADWAVYPTDFLVRVNDVFLGLDKEALPEEEELAGGSPRSSSSG
EWGGGGGGPLDGAALRRLAAGRAPGPAADLAADIDGVPVDEDIDGVPLEAETDVDKERAA
GGGAGGGAGGGGGGGGAFVPSRWESVEPAPADAWPAPGSPPAGSPPPPVTTPQNNDSEEQ
QLKRETLREIEVRVLKYADEMEAGLRQRRPALTQQQQIQHYRRKLIKKALREAAAGSAEP
EPRRRSPDDDAFSTSSKKSKKSREASLSPPPTKRRYTERKSRSRSRSRERDRERERERER
EREKERERERERERERERERERERESRRRRSPATPPHHHRKHKHNKYKY
NT seq 2670 nt   +upstreamnt  +downstreamnt
atgaattacactatgagtgctagaggattgtccaagagggaattggaggagttgcgaaag
aaggaggaagaagaggctgcggctcatgtattcaaagaattcgtggaaacatttcaagag
gtgccgacccccacttccaaggtctgggtgaaggctggcacttatgatgcaggggccaga
aaggaagacacatcagagcgcggcaagctttacaagccagtgtctcgtttggatgagaag
cgaggagtggctgaggtagatgtggtgcggagtctcgcggcgcgtcccgagccccctggc
agaccgcgcgctaaacagaaggggcaggacaagaagaagagtaaccttgagctgttcaaa
gaagagctaagacagatccaagaggagcgctcagaacggcacaagtacaagaatgtactg
cgcgagagaggcgtggtgggggtggagcccgtggtcgacgtcatccccgatgtcggctcc
tacgacaccggcgatcctaacactacgaatttgtatttaggcaacttgaacccaaagata
acagaacaacagctaatggaaatattcggccgttacgggcccctcgccagtatcaagatc
atgtggccgcgctcagacgaagaaaaagcgcgcggtcgtaactgcggattcgtggctttc
atgtctagaaaggacggcgaaagggctctggctcgtataaatggcaaggagataatgaac
tacgagatgaagctgggttggggcaaggcggtggtgatccccccggtcccgatctacatc
ccgccgtcgctgcagcagccgcaccagcccccgccgaggtcggggctgcccttcaacgcg
cagccgcccaaacatctcgcgaacaagataccgcgagttcgtcccggagaatattatccg
agtgatccggaagataaagaagtctatgaacagatattatcacaatcaatagtcaaagta
gtagtgcctacagaaagaaacatccttatgctcatccaccgtatggtagagttcgtgatc
cgcgaaggtcccatgttcgaagccataatcatgaacaaggagatgaacaacccgttcttc
cggttcctgttcgagaaccagtcgcctgcgcacgtgtactacaggtggaagctgttctct
ttgctgcaaggcgactcgccgaagcagtgggcgctggatgacttccgcatgttcaaaggc
ggttcagtatggcgcccgccggtaatgaacctgtatactgcgggcatgcctgaagaactg
gttgaagaggacgatgccaaggataacatccgtggcacgctgtccaataaccagcgcgac
cgcctggaggagctgatccgcgggctgacggcgtcgcggcagagcgtgggcgcggccatg
gcgtggtgcctggagcacgcggaggcggcgggcgaggtggcgcgctgcctggcggagtcc
ctcacgggcgagcacacggggccgcacaagcgcatcgcgcggctctacctgctgtccgac
atactgcacaacgccggcgccaagctcaccaatgcgagtgcgttccgtggcgcgttccaa
caacggctggtggagataatgcgcgcgtgccacgcggcgtgggcgcgcctggagtcgcgg
ctgcagcgcgagggcttccgcgcgcgcgtcacgcgcacgctgcaggcctgggccgactgg
gccgtgtaccccaccgacttcctcgtgcgcgtcaacgacgtgttcctggggctggacaag
gaagcgctgccggaggaggaggagctggcgggcgggtcgccgcgctcgtcgtcgtcgggc
gagtggggcggcggcggcggcggcccgctggacggcgcggcgctgcggcggctggcggcc
ggccgcgcgcccggccccgccgccgacctcgccgccgacatcgacggcgtgccggtggac
gaggacatagacggcgttccgctcgaggcggagacggacgtagataaggagcgcgccgcg
ggcggcggggccggcgggggcgcgggcggcggcggcgggggcgggggcgccttcgtgccg
tcgcgctgggagagcgtggagccggcgcccgcggacgcgtggccggcgcccggctcgccg
cccgcgggcagcccgccgccgcccgtcaccacgccgcagaacaacgacagtgaagaacag
cagttgaaacgggagacgctccgcgagattgaagtgcgagtgttgaaatacgcggacgaa
atggaggcgggactgcgacagcggcggcccgccctcacgcagcagcagcagatacagcac
tacaggaggaagctcatcaagaaggcgctccgcgaggcggcggcgggcagcgcggagccc
gagccgcggcgccgctcgcccgacgacgacgccttctccacatcatcgaaaaaatccaag
aaatcccgagaggcttcattgtcaccaccacctaccaaacggcgttatacagagcggaaa
tctcgatcacggtcacgatcgcgcgagcgggacagggaaagagaacgcgagcgggaaaga
gaaagggagaaggagagggaaagagaacgcgaaagagaaagagagagggaacgcgagcgg
gaaagagaaagggagagtcgcaggcgccgctcgcccgccacgccccctcaccaccaccgc
aaacacaaacacaacaaatataagtactga

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