Amyelois transitella (navel orangeworm): 106129810
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Entry
106129810 CDS
T09957
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
atra
Amyelois transitella (navel orangeworm)
Pathway
atra03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106129810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atra03019
]
106129810
03016 Transfer RNA biogenesis [BR:
atra03016
]
106129810
03012 Translation factors [BR:
atra03012
]
106129810
04131 Membrane trafficking [BR:
atra04131
]
106129810
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
atra04147
]
106129810
Messenger RNA biogenesis [BR:
atra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
106129810
Transfer RNA biogenesis [BR:
atra03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
106129810
Translation factors [BR:
atra03012
]
Eukaryotic type
Elongation factors
106129810
Membrane trafficking [BR:
atra04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
106129810
Exosome [BR:
atra04147
]
Exosomal proteins
Proteins found in most exosomes
106129810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
106129810
NCBI-ProteinID:
XP_013183942
LinkDB
All DBs
Position
3:complement(10897294..10898685)
Genome browser
AA seq
463 aa
AA seq
DB search
MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT
GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKK
IGYNPAAVAFVPISGWHGDNMLEASTKMPWFKGWNVDRKEGKAEGKCLIEALDAILPPAR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGTIVVFAPANITTEVKSVEMHHEALQ
EAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPV
LDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPP
LGRFAVRDMRQTVAVGVIKAVNFKDATSGKVTKAAEKAGKGKK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaggaaaagactcacattaacattgtcgtcattggacacgtcgactccggcaag
tccacaaccactggtcacttgatctacaaatgcggtggtatcgacaaacgtaccatcgag
aagttcgagaaggaggcccaggaaatgggcaagggttccttcaaatacgcctgggtattg
gacaaactgaaggctgagcgtgaacgtggtatcaccatcgacatcgccctgtggaagttc
gagaccagcaaatactatgttaccattatcgacgctcccggccacagagatttcatcaag
aacatgattactggaacctcgcaggccgactgcgccgtgctgatcgtcgccgccggtacc
ggagagttcgaagctggtatctccaagaacggccagacccgtgagcacgccctgctcgcc
ttcaccctaggtgtcaagcagcttattgttggtgtcaacaaaatggactccactgagcct
ccatacagtgagtctcgtttcgaggaaatcaagaaggaagtctcctcatacattaagaag
attggttacaacccagctgctgtcgctttcgtacccatttctggctggcacggagacaac
atgctggaggcatccaccaagatgccctggttcaagggatggaatgttgaccgcaaggaa
ggtaaggctgaaggcaagtgcctcatcgaggctttggatgccatcctgccccctgctcgt
cccacagacaagcccctccgtcttccccttcaggatgtctacaaaattggtggtatcgga
acggtgccagtaggcagagttgaaactggtatcctcaagcccggcaccattgttgtattc
gcccccgccaacattaccactgaagttaagtctgttgagatgcaccacgaggctcttcaa
gaggccgtgcccggagacaacgttggtttcaacgttaagaacgtctccgtcaaggagttg
cgtcgtggatatgtcgctggcgactccaagaacaacccccctaagggtgctgctgacttc
accgcacaagtcattgtgctcaaccaccctggacagatttcaaacggttacacgcctgtg
cttgattgccacacagcccatattgcctgcaaattcgccgaaatcaaagagaaggtcgac
cgtcgtactggcaaatctactgaggacaatcctaagtccatcaagtctggagatgctgct
attgtcaaccttgtaccctccaagcctctgtgcgtggagtccttccaggagttccctccc
ctcggtcgtttcgctgtgcgtgacatgaggcaaaccgtcgctgtgggtgtcattaaggct
gtaaacttcaaggatgctaccagcggaaaggtcaccaaagccgccgagaaggctggaaag
ggcaagaagtag
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