Amyelois transitella (navel orangeworm): 106129819
Help
Entry
106129819 CDS
T09957
Name
(RefSeq) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atra03400
]
106129819
Enzymes [BR:
atra01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
106129819
DNA repair and recombination proteins [BR:
atra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
106129819
Prokaryotic type
106129819
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Caud_tail_N
Motif
Other DBs
NCBI-GeneID:
106129819
NCBI-ProteinID:
XP_013183955
LinkDB
All DBs
Position
3:complement(join(10763617..10763810,10764201..10764442,10765052..10765244,10765688..10765886,10766408..10766566,10767168..10767370,10767456..10767870))
Genome browser
AA seq
534 aa
AA seq
DB search
MRIFSQSLLLRNTLVKMASAPKRIKLSSSSTNTENETKTDVEGFMKSIQDKREETAESIL
KYKFNKKRVRIISQEQLVLDNCEGIVYWMSRDSRVQDNWAFLFAQKLALKNEVPLHVCFC
IIAKYLDASVRQFHFLLRGLEKVAADCKKLNISFHLLEGSGADALPQWVEKHNIGAVVCD
FNPLRVPLGWLDGVKKKMKKDVPLIQVDAHNVVPCWVASDKQEYSARTIRKKITSKLDEF
LTEFPPVIKHPYTSKFKPEPIDWAEAIESREADKTVGPVDWAKPGYDEAIKMLKSFLDKR
LKIFASKRNDPTVDALSNLSPWFHFGQISVQRVALCVQEYKSKHTESVNSFLEEAIVRRE
LADNFCFYSEHYDSIKGASAWAQKTLDDHRKDKRTHLYTLEELSNAKTHDDLWNSAQLQL
AKEGKMHGFLRMYWCKKILEWTPTPEDALKYAIYLNDHYSIDGRDPNGYVGCMWSICGIH
DQGWAERAVFGKVRYMNYDGCKRKFNIHAFIARYGGKAHKYVPKKNSDGKKSDK
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgagaatattttctcagagtttactattaagaaatactttagtaaaaatggcatcagct
ccaaaaaggattaagttatcgtcatcatcaacaaataccgaaaatgagacaaaaactgat
gttgaaggatttatgaaaagcattcaagacaaaagagaagagactgcggaatcaattttg
aagtacaaattcaataaaaagcgagtcagaattatatcacaagagcaacttgtattagat
aattgtgaaggaatagtttattggatgtcaagggacagcagggtccaggataactgggcg
tttttgttcgcccaaaaacttgccttgaaaaacgaagttccacttcatgtgtgtttttgt
attatagcgaaatacctggatgcttccgtcagacaattccattttttactgagaggttta
gaaaaagtggcagcagattgcaagaaactgaatatttctttccatttgcttgagggcagt
ggagctgatgctttaccccagtgggtggaaaaacataacattggggctgttgtgtgtgac
ttcaatccattgcgagtgcctcttggctggttggatggggtcaagaagaaaatgaagaaa
gatgtgccattaatacaggtggatgcccacaatgtggttccttgctgggtggcatcagac
aagcaagaatattcagctcggaccatcaggaaaaagatcacctcaaagctggacgagttc
ctcactgaattcccaccggtcatcaaacatccgtacactagcaagttcaaacctgagcca
atagattgggcggaagccatagaatctcgggaggcagataaaactgtagggccagtggac
tgggcgaagccaggctatgatgaagccattaagatgctgaagagctttttagacaaaaga
cttaaaatttttgcttcaaaaagaaacgaccctacagtagatgccctaagtaatttgtct
ccgtggtttcattttggccaaatctcggtacagagggtggcgctatgtgttcaagagtat
aaatccaagcacacagagagtgtgaactcattcctggaagaggctatagttagacgggag
ctggctgataacttctgcttttactcagaacactatgactccattaagggggcgagtgcg
tgggcgcagaagactttggacgaccacagaaaggacaaaagaacccacttatacacgcta
gaagaattatctaatgccaaaacccatgacgacctttggaactctgctcaactacaattg
gcaaaggagggcaagatgcatggctttctgaggatgtactggtgcaagaagatcttagag
tggacaccgacgcctgaagacgctttgaagtatgcaatatatctgaatgaccattacagt
atcgacgggcgggaccctaatggatatgttggttgcatgtggtcaatatgcggcatacac
gaccaaggctgggcagaacgcgcggtgtttggtaaagttcgctacatgaactacgacgga
tgcaaacggaagttcaacattcacgcgttcattgcccgctatggtgggaaagcgcacaaa
tacgtcccaaagaaaaacagcgatggaaagaaaagtgacaagtga
DBGET
integrated database retrieval system
