Amyelois transitella (navel orangeworm): 106129971
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Entry
106129971 CDS
T09957
Name
(RefSeq) uncharacterized protein LOC106129971
KO
K24526
RNA-binding protein 12
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atra03041
]
106129971
Spliceosome [BR:
atra03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
106129971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RSRP
Motif
Other DBs
NCBI-GeneID:
106129971
NCBI-ProteinID:
XP_013184156
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All DBs
Position
22:join(7268224..7268366,7282651..7285450)
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AA seq
980 aa
AA seq
DB search
MSVIIRLQNLPWSANALDIRNYFRGLSIPEGGVHIVGGELGDAFIAFSTDEDARQAMMLD
GGKIKEIQVKLLLSSRSEMHKVIETARQSVPILSLAAAAPAPAPAPAPVQPVAPVVAQIT
PFSAALGKSPLGFGIPGIGNPQEIPQPAVIEPPAPLISPSANASPQDETSESERKRSKEK
DKRRSRSRSRSRDRKDRKRDRRDRSRSRERRRRERSRSRERRDRKRDRKERSRSRDRSPS
RRSRDRRDRNQRDSSENTNENHESTLLNATPGRQSPLITAVMLNGQAVLQDGQQNVYSDP
DMADAFSKLQELGKKRNPNAFQGEAPVGNGNRFQRGGRSGATNSFRREGRSRFDNSDSNG
NNARDVCVAIRNAPNHTGYGDVRRFFPFLIDQHGIKMINDNMGRRTGNIYVKFCDPRSKQ
LALQRRNNELKDVQVTIESIPDDVYDAAIDSFLPYREENGGNDLPIVLVTDNDGRTPPSV
LKLADLPNFVKEHDIIKAFSEFSLLSITLNDCRATRTKVAFVQFAKAEDAKSAFEKRDNY
LFGRRQPVITPLTVDEFNKVKTGDKREREAEQPQPAEIMEQPAEPVVPRDPRQRRQVEDK
SPKVNPQLQVGPQTGAPQFFGAPFVPPQNFAAAFAAPQFSGFPAAAMDPRMAAANWAARP
GFPDQGKSMQTMSNSAAQVDADDEPLDCVLMKGLPRAATDRTIVNFLSDTGAVPSRIHLM
LDGNGLPSGDCFCEFRSVQEARMAATKHGSNLEGCRVTVDLVTRTVVEEALEGPKQPEMP
GPGAGLLGSGPPMPQYFDGPQGGPPRGGFMGRGPYRGRGGFDSNRGFDSNRGFDRGGYRG
GFDNSRGNYRGRGGFDRGGRGGFDRGGRGSRGFGGRGRGGYENGRDVRDDDQDPALEDFG
APGCVVSMENVPFRASIDDIMNFFSEFDLTQDDVIRRYNERGQPTGDARVAFRTPFDAQR
AVKTRHMDTIHDRRISLTIL
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtcatcataagactgcagaatctcccttggtccgcaaatgccctggatattagg
aattactttcgcggcctctccatccccgaaggaggggtccacatcgtaggaggcgaactt
ggagatgctttcattgcgttcagtacggacgaggacgcgcgccaagccatgatgctggac
ggcggcaagataaaggagatccaagtgaagctccttctcagctctcgctcggagatgcac
aaggtcatcgagacggcccgccagagcgtccccatcctcagcctcgccgccgccgcgccc
gcccccgcccccgcccccgcgcccgtgcagcctgtcgcccccgtcgtcgcacaaataaca
cccttctcagccgcactaggcaaaagccccctcggcttcggaataccaggcatcggcaac
cctcaagagataccccaacctgccgtcatagaaccccctgctcctttgatcagtccttca
gcaaacgcgtcaccccaagacgaaaccagcgaaagcgagaggaaacgcagcaaggaaaag
gacaagcggaggtccaggtcgcggtccaggtccagagacaggaaggacaggaagcgagac
cgcagggacagatcgaggtccagggagcggaggcggcgagaacgcagtcgcagcagggag
cgcagagatcgcaagagagacaggaaagaacggagccgctccagggaccgctcgccgtcg
cggcggtcgcgcgacagacgcgacagaaaccaaagggactcgagcgaaaataccaacgag
aaccatgagagcactttgttaaacgccacgcccggacgacagtcgccgttgattactgcg
gtgatgctaaatggccaggcggtgctgcaggacgggcagcaaaacgtgtacagcgacccc
gacatggctgatgcgttcagcaagctccaagagctgggcaaaaagcgtaaccctaacgcg
tttcaaggagaggctcccgtggggaatggtaataggttccaaaggggaggcagaagtggg
gcaacaaatagtttccgtcgcgaaggccgctcgcgcttcgataacagtgattctaatggt
aacaacgcacgagacgtatgtgtcgctataagaaatgcacctaaccacactggctatggc
gatgtccgtcgattcttcccgttcttgatagaccagcacggcattaaaatgattaatgat
aacatgggaagaagaacaggcaacatttatgttaaattttgcgatcctagatcgaagcag
ctggcgttgcagcgcagaaataacgaattgaaagatgttcaagttactatagagtcgata
cccgacgacgtgtacgatgcggcaatagattcattcctcccatatcgagaggaaaacggt
ggtaatgatcttccaatcgttcttgtcactgacaacgacgggaggaccccgccgagtgta
ctcaagctggcagaccttccaaactttgtcaaggaacacgatattatcaaagcttttagc
gagttttccctattgtccattacgttgaatgactgccgagcgacaaggaccaaagtagcg
ttcgtacaattcgcaaaagcagaggacgcaaaatcggcgttcgaaaagagagataattac
ctctttggcagacgtcaacccgttatcacacccctgacagtagacgaattcaataaagta
aaaactggtgataagagagagagagaggcagagcaaccacagccggcagaaatcatggag
cagcccgcagagcccgtggtgccgcgagatccgcgtcagaggcggcaagtcgaagataag
agtcccaaagttaatccgcaactacaagtcgggccacaaacaggtgcgccacaatttttc
ggggcgcctttcgtcccgccacagaacttcgctgctgcatttgcggctcctcaattcagt
ggtttcccagctgccgcgatggaccctcgcatggccgccgctaactgggccgcgcgtccc
ggcttccccgaccaggggaaatcaatgcagaccatgtccaactccgcagcacaagtagac
gcagatgacgagccattggattgcgtcctcatgaagggtctcccgcgagcggctacagac
cggaccatagttaatttcttgtccgatacgggcgccgtgccgtctagaatacatctcatg
ttggacggcaacggcttgccgtccggggactgtttctgtgagttccgatccgtccaggaa
gccagaatggccgccacaaaacacggttcgaatttagaaggttgtcgcgtcacagtggat
ctagtgacgaggactgttgtcgaagaagctttagaaggaccgaagcaaccggaaatgccg
gggccaggtgcggggctcctcggcagcggcccgcctatgccgcagtacttcgacgggccg
caaggtggcccaccccgtggaggattcatgggcaggggtccttacagaggtcgaggagga
ttcgattccaatagaggcttcgactcgaacagaggtttcgatagaggcgggtacagaggc
ggcttcgataattcgcgcggtaattacagaggtcggggcggattcgacagaggcggtcgg
ggaggtttcgacagaggggggcgggggtctcgtggctttggcggtcgcggtcgcggcggc
tacgaaaacggccgcgacgtccgcgacgacgaccaggaccccgcgctcgaagacttcggc
gcgccgggctgcgtggtttctatggagaacgtaccgttccgtgcaagtatcgacgacatc
atgaacttcttcagcgagttcgacttgacgcaggacgacgtgattcggcgctacaacgag
cgcgggcagcccaccggcgacgcccgggtagccttccggacgcccttcgacgcgcaaagg
gccgtcaaaacgagacacatggacaccatccacgaccgcagaataagcctcacgatatta
tag
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