KEGG T09957: 106130020

Amyelois transitella (navel orangeworm): 106130020

Entry

106130020         CDS       T09957

Name

(RefSeq) probable ATP-dependent RNA helicase kurz

K14780

ATP-dependent RNA helicase DHX37/DHR1 [EC:5.6.2.6]

Organism

atra Amyelois transitella (navel orangeworm)

Brite

KEGG Orthology (KO) [BR:atra00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:atra03009]
    106130020
Enzymes [BR:atra01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     106130020
Ribosome biogenesis [BR:atra03009]
Eukaryotic type
  90S particles
   Helicases
    106130020

SSDB

Motif

Pfam:

DHX37_C OB_NTP_bind Helicase_C DEAD HA2_C AAA_22 ResIII WHD_HA2 ATPase AAA_19 nSTAND3 T2SSE AAA_30 Flavi_DEAD nSTAND_NTPase5 NAT10_TcmA_helicase AAA_16

Other DBs

NCBI-GeneID:

106130020

NCBI-ProteinID:

XP_013184224

LinkDB

Position

22:complement(join(4969508..4969584,4970921..4971123,4971639..4971780,4972272..4972496,4973425..4973620,4973998..4974153,4974783..4974923,4975368..4975493,4975982..4976210,4976592..4976811,4977188..4977350,4978095..4978241,4978580..4978726,4979049..4979290,4979705..4979920,4980363..4980821,4981395..4981572,4981826..4982008,4982279..4982353))

AA seq 1174 aa
MGKSRHNAKARQVVKTNIDNTETNEIQVEFSTNEYGASDTSNLLVLPSKKRQTKVISDKK
EKTRFLSKAQRKRLEKIVDKKKKKENRSALLESLSQVQASPAEVQQLTAISAVQTIGLRK
LNEYNLETNIETHEPAENKKFSSIAGAKKRLRLLKMDNAGKIKKGKYDPNVVGLQESSSE
DLSSDSDDEPEIIQNGNKDSVNDSVEVDDDSKIAETEICKKKELEVSQEKEKEVVANLDN
DVKVEKKKPLLEHATVHIEVKRDPKVQVARLKLPILGEEQKIMELVNENEFLLVAGETGS
GKTTQIPQFLYEAGYAEQRMIAVTEPRRVATVAMAARVGHELGLTSREVSYLMRFEGNAT
KDTKIKFMTDGVLLKEIQSDFLLSKYSVVIIDEAHERSVYTDILLGLLSRIVPLRRKRGN
PLRLIIMSATLRLQDFTENTRLFKEPPPVVKIDSRQFPVTVHFNKHTNSDYLKEAYTKTV
KIHTRLPEGGILIFVTGQQEVHYLVRKLRASFPYRKDVDYSKLITKSKAVEVDPALDSEP
EDIESDDDEVEREMKRMRKARRKAKLKSKSLPKINLDDYDMPDDDGQADLVDDEDSEGHL
SDSDAEEDTLAPVIKSCRQPLWVLPLYSMLSSSKQSRVFDSPPTGARLCVVSTDVAETSL
TIPHIKYVVDCGKKKMRVYDHVTGASAWRVVWTSQASAEQRSGRAGRVGAGHAYRLYSSA
VFQHDCPPHHPPDLCRRPVDDLVLMMKCMGIDKVVNFPFPTAPDRLLLRLAEKRLETLGI
LERHENKNKRKDDEDILKVTPLGKAVSAFPLLPRYGKMLALSHQQNLLPYTVALVAALTV
PEVMSGNSDSWPATGNTLLLGDPGVLLRVVGAAEYAFVKGEEELFCAKYGVREKAIKEIR
KLRKQLTSEINLSVAGVDATIDPEMQPPTDTQARLLRQLVLSGLGDQVGRKIGLEEVKQG
EDKRKFKYAYHCGDLEEPVHLHSSSILRKTIPEWVVYQELYETGTEQSRKMIMRNVTAVE
PEWLPVYVPHLCNLGEPLTDPEPRYDENSGRVKCHFKGTFGKAGWELPTVEIDYPDKIDR
YRWFARFLLEGAVFPKLRKYSGSLMSPPSTMVKSWAKLQPRTEILLKALIAKRAGTRDAM
KKVWEDQPSYLLDEYLKWLPESAHNEATMYWPPL

NT seq 3525 nt +upstreamnt +downstreamnt
atggggaagtctcgacataatgcgaaggcaaggcaggtcgtgaaaacaaatattgataac
accgaaaccaatgagattcaagtggaattctctacaaatgagtatggagcatctgacact
agtaaccttctggtcttaccatcaaagaaaagacaaactaaagttatatcagacaagaaa
gaaaagaccagatttctctcgaaagctcagagaaaacggttggaaaaaattgttgacaag
aagaaaaagaaagaaaatagatcagcactactagaatcactgtcacaagtacaagcttcg
cctgctgaagtgcaacagctgactgccatatcagccgttcagactataggtttgaggaag
ttaaacgagtacaacttggaaactaatatagaaactcacgagccagcagaaaataagaag
tttagcagcattgctggagccaagaaacgactaagactattgaaaatggataatgcagga
aaaattaaaaagggcaaatatgacccaaatgtagtgggcctccaggagtcttctagtgaa
gatctgagttcagactctgatgatgaaccagaaatcatacaaaacgggaataaagattct
gtaaatgacagtgttgaagtagatgatgatagtaaaattgctgaaacagaaatttgtaaa
aagaaagagttagaagtatcccaagaaaaagagaaggaagtagtagcgaatctggacaac
gatgtgaaggtagaaaagaaaaagcctttacttgaacatgcaacagttcacatagaagtg
aaaagagacccaaaagtgcaggtagcaaggttgaaattgcctattttgggggaagagcag
aaaataatggagttggtcaatgaaaatgaattcctgcttgtagctggagaaactggtagc
ggaaaaacgacgcaaatcccccaatttctatatgaggctggctacgccgagcagagaatg
atagcggtgacggaaccccggcgtgtggccacggtggccatggcggccagggtgggccac
gaactgggcctgaccagcagggaggtgtcgtacctcatgaggttcgaggggaacgccact
aaggacaccaagatcaagtttatgactgatggtgtcctgctcaaagagattcaatcagac
tttctacttagcaagtattcagtcgtgatcatagacgaagctcacgaacggagcgtgtat
acggatattttacttggcctgttgtctagaatagtacctcttaggagaaagagagggaac
cctctcaggcttattattatgtcggcgacattgaggttgcaagatttcacggaaaatacg
agattgtttaaagaaccaccaccagtagtgaaaatagactccagacaatttccggtcacc
gtgcacttcaacaaacacacaaacagtgattatttgaaggaggcatatacgaagactgtc
aaaatacacacaaggttgcccgaaggtggaattcttatcttcgttacgggacaacaagag
gttcattacttggtgcgtaaactgcgcgcctcgtttccttaccgcaaagatgtagattac
tcgaaacttatcacaaagagtaaagcggttgaagtggaccctgcattggattcggaacct
gaggatattgagtctgatgatgatgaggttgaaagagaaatgaaacgtatgaggaaagcg
cgcagaaaagcgaagttgaaatctaaatctttgcccaaaataaacttggacgattatgat
atgcccgatgacgacggacaggccgatttggtagacgatgaagatagtgaaggccatctc
agtgattctgatgccgaagaagacactctagcaccagtaattaaatcgtgccgtcagccc
ttgtgggtgctgccattgtactctatgctgagttcgagcaagcaatcgcgcgtgttcgac
tctccgccgaccggcgcgagactctgcgtggtcagtactgacgtcgccgagacttctctc
actataccgcatatcaagtatgtcgtcgattgcgggaagaagaaaatgcgtgtatacgac
cacgtgaccggcgcaagcgcatggcgtgtagtatggacctctcaagcgagcgccgaacaa
cgttccggcagggcgggcagagtcggggccggccacgcgtatcgactgtacagcagcgcc
gtgttccaacacgactgcccgccgcatcaccccccggatctgtgcaggcgaccggtggat
gacctagtgctcatgatgaagtgtatgggaatagataaggtggttaacttcccgtttcca
acggcgccggacagattattactccgtctggccgagaaacgtctagaaacactcggtatt
ttggagaggcacgaaaacaagaacaagaggaaagacgatgaagatatattaaaagtaact
ccactcggtaaagcggtgtcggcgtttccattgctaccgcggtacggcaagatgttagct
ctaagtcatcaacagaatctcctgccttatactgttgccctggtagccgctctcactgtg
cctgaggttatgtctggcaatagtgacagttggccggcgactggcaacactctcctgctc
ggcgaccctggcgttttgctgagagtggttggcgcggctgaatacgcatttgttaaaggg
gaagaggaattgttttgtgcgaaatacggagtgagagagaaggctataaaagaaatccgc
aagcttcgtaaacagttaacttcggaaataaacttgagcgtggccggtgtggacgcgacc
atagaccccgagatgcagccgcccactgacacgcaggccaggctgctgaggcagctcgtg
ttgagtgggctgggagaccaggtcgggaggaaaatcggcttggaggaagttaaacaaggc
gaagacaaacgtaaattcaaatacgcctaccactgcggcgacttagaagaaccagtacat
ctgcactcatcttcgatactcaggaagactatacctgaatgggtggtttatcaggagttg
tacgagacgggcacagagcaaagcagaaagatgatcatgaggaatgtgaccgctgtagag
cctgaatggttgccagtttatgtgccacatctgtgtaatttaggggaaccactcacagac
cctgagcctagatacgacgagaattctggaagagtcaaatgccatttcaaaggcaccttc
ggcaaggcgggctgggaactgcctaccgttgaaatcgactatcctgacaaaatcgaccgg
tacagatggttcgctcgtttcctactagagggcgctgtgttccccaaacttcgtaaatac
tccggctcgctgatgtcccctccatctactatggtgaaaagttgggccaaactccagcca
aggacagagatacttctcaaggctcttattgcgaagcgagcggggacaagagacgcgatg
aagaaagtttgggaagatcagcctagttatctgctagatgagtatcttaaatggctcccg
gagtccgcccacaacgaagcaactatgtactggccacccttatga

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