KEGG   Amyelois transitella (navel orangeworm): 106130094
Entry
106130094         CDS       T09957                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC3
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
atra  Amyelois transitella (navel orangeworm)
Pathway
atra03020  RNA polymerase
atra03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:atra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    106130094
  09124 Replication and repair
   03420 Nucleotide excision repair
    106130094
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:atra03021]
    106130094
   03400 DNA repair and recombination proteins [BR:atra03400]
    106130094
Transcription machinery [BR:atra03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     106130094
  RNA polymerase III system
   RNA polymerase III
     106130094
  RNA polymerase I system
   RNA polymerase I
     106130094
DNA repair and recombination proteins [BR:atra03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      106130094
SSDB
Motif
Pfam: RNA_pol_Rpb8 RNA_pol_RpbG
Other DBs
NCBI-GeneID: 106130094
NCBI-ProteinID: XP_013184310
LinkDB
Position
31:join(2577832..2578124,2578314..2578473)
AA seq 150 aa
MAGVLFEDIFNVKDMDPEGKKFDRVSRLHCESESFKMDLILDINSWIYPMELGDKFRLVL
ATTLREDGYPDGGEWNPLETEGNRADSFEYVMSGKVYRIEGDEAAMEPASRLAAYVSFGG
LLMRLQGDANNLHGFEVDQHMYLLMKKLAF
NT seq 453 nt   +upstreamnt  +downstreamnt
atggcgggcgtgttatttgaagatattttcaacgtaaaagacatggaccctgagggaaag
aaattcgatcgagttagccggctacactgtgaatctgaatcgttcaaaatggacttgatt
ttagacataaattcctggatatatccgatggaattgggtgataaatttagattagtgctt
gctacgacgttgagagaggacggttaccccgacggcggtgaatggaaccctttagagacc
gagggaaatcgtgctgatagttttgagtatgtcatgtcggggaaagtgtataggatagaa
ggtgacgaagcagcaatggagcctgcctctcggttagctgcgtacgtgtcattcggaggc
ctcctcatgcggttacaaggggacgccaacaacttgcacgggtttgaggtcgaccagcac
atgtacttgttgatgaagaaattagctttttaa

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