Amyelois transitella (navel orangeworm): 106130107
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Entry
106130107 CDS
T09957
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atra04131
]
106130107
Membrane trafficking [BR:
atra04131
]
Protein recycling
Others
EARP complex
106130107
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Syndetin_C
Vps54_N
CC_CDK5RAP2
EXOC6_Sec15_N
Motif
Other DBs
NCBI-GeneID:
106130107
NCBI-ProteinID:
XP_060809238
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Position
31:join(2921504..2921596,2922310..2922450,2922995..2925490)
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AA seq
909 aa
AA seq
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MMPEDAVENRHGPPGVNSRSLGAAHTAADLEVLREIENVYFSPPSEFDAARYALEHAPAP
LTCDAIESMFAKLKRQQQVVSGKALHLISQQRDNCDREFAEIQNIRTQLSETLEKCQEAR
NSLRSASNHLTISTFVILANFRKRQIIRSVLKSLELLRSLRSVEKDVAELLDRKDYYEAI
DLILRSRKAAGNHKEFTCIADLNTRLQDTLDMTEEKLDAVLSSLCYNFDGNVFRKLRKAF
NLLGKTQAAMEQLHMHYSSAVNLSSADALRPYIGEANLDVKFQDMCQLVQPNKAPVCLLN
LCEKLFLIMRSYYLLVNWHTKHDEEDTSSSSNVFEIEKSVSREYIRQKLKAGLMRIWHDV
QAKVSSFLKSSGLEEYPFEKFIQMLGILRKLTQIAEVFCGDKSDILQDFIKTQSVLYIKN
YHRGRMDELKLFLENEGWEQCPVKSTFNLLNLQEFKQFKKYLNPKHETSISKAQSDGGSS
VPSQDDSVYMARYFNQKSNHTPFEIFRNENVTNDDIFGLEPELEASDDSDDEPDELKRDF
VEETDKEYSSTNEKVIESPSKVKDSVIVTNTTLSVLRNCGQYLQICRYLPQISLEVVMLM
NQLFDYYFYTVHHFFTSDLDVASTTLYTSKLNVVLKRISNSIDTGRNAGDGDSKTFPCAE
LPQHLNLNSEDSLHGLSERIVAVESVIFLSKQFELLQPYLESIVATHQRMLLEHFRDNTL
AVVADLRMPVYMCSASKAVDARSALIAMSQVKWDVKNVAVEHSPYVDMIIRKIQVFALRL
DNVSAKVSLNLEVLNSVWAMVSKFVVHLLVEGYSNANKCSNGGRGLMQLDYRQLFVKLEK
ISGLKPIPYQDYVDRYVKAYYLPRKGLEDFVRERTEYSNKHLLALVASACENKRDRQALA
AIIEGRDAA
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgatgcccgaagatgcagtggagaaccgtcatggaccccccggagtcaactcgcggtcg
cttggtgctgcccatacagcagccgatttagaggtactccgcgagatagaaaatgtgtac
ttctccccgccatcagagttcgacgctgctcggtacgcgctggaacatgcgccggcgccg
ctcacttgcgacgcgatagaaagcatgttcgctaagcttaagagacagcaacaggtggtg
tccgggaaagctctccatctcatatcccaacaacgagacaactgtgatagggagttcgct
gaaatccagaacattcgaacccaactgtcagaaacactagagaaatgtcaagaggcaaga
aattccctacgttcggcgtccaaccatttaacaatatcaacgtttgtcatactggccaac
ttcagaaaacgacaaatcataaggtccgtccttaaatctcttgagctgttaagaagtttg
cgtagtgtggaaaaagatgtagccgaattgttagataggaaagattattatgaagctata
gacctgattttgcgtagtagaaaagcggctggtaatcacaaagagttcacttgtatagca
gacttgaatactaggttacaagacacgttagatatgactgaagagaaactagatgcggta
ttatcgtctttatgttataatttcgatggtaatgtttttaggaaattgcgtaaagcgttc
aatcttttaggtaagactcaagccgccatggaacaattgcatatgcattattcatctgca
gtcaatttatcttccgcagatgcactgagaccgtatataggtgaggctaatttggatgtt
aagtttcaggatatgtgccaattggtgcaacctaacaaagctcccgtttgtcttttaaat
ttatgcgagaaactcttcttgattatgaggagttattaccttttagtaaattggcatacg
aaacatgacgaagaagatacatcgtcttctagtaatgttttcgaaattgaaaagagtgtg
agtcgtgaatatataaggcagaagttgaaagctggtttgatgaggatctggcatgatgtt
caggcgaaggtgtcatcgtttttgaagagctctggcttagaagagtatccatttgagaaa
ttcatacaaatgttaggcattctaagaaaattaactcaaatagctgaagtgttttgcgga
gataaatcagacattttacaagatttcatcaaaacgcaaagtgttttgtacataaaaaat
tatcacaggggtcgaatggatgaattgaagttgtttttggagaatgagggctgggagcag
tgcccagtgaaatctacattcaatttgttaaatttacaagagttcaaacagtttaaaaag
tacttgaacccaaagcatgagacatcaatctccaaagctcagtccgatggtggttcgtca
gtgccttctcaagacgacagtgtctacatggcgagatattttaatcagaaatccaatcat
actccttttgagatatttcgaaatgagaatgtcactaatgatgatattttcggcctcgaa
cctgaattggaagctagcgatgattctgacgatgaacctgatgaattaaagagagatttc
gttgaagaaacagataaagaatattcaagtacaaatgagaaagtcatagaaagtccttct
aaagttaaagacagtgtgatagttaccaacacaactttatcagttttgagaaattgtggt
cagtatttgcaaatctgtaggtatctgccgcaaatttctctagaagtagtcatgcttatg
aaccaacttttcgattattatttttacacagtgcatcattttttcacgtcagatttagat
gtggcatcaacaactttatacacgtcaaagttaaatgtagttttaaaaagaatttcaaat
agtatagacactggcaggaatgcgggcgatggagattcgaaaacattcccatgcgcagaa
ttaccacagcatttaaatttaaattccgaagacagtcttcacggtttgagcgaaagaata
gtcgcggttgaaagcgtaatatttctatcaaaacaatttgaactcttacaaccttactta
gagtcgatagtcgcgacgcatcaaaggatgcttttggaacattttagggataatactcta
gctgttgtcgcagatttaagaatgcccgtttatatgtgttcggcttcaaaagctgttgac
gcacgttccgccttaatagcgatgtcacaagtcaagtgggacgttaaaaacgtagctgtg
gaacattctccatacgtagacatgattatacggaaaattcaagtgttcgcgctccgttta
gataatgtttcggcgaaagtgtctctaaatttggaagtgttaaattcagtctgggcgatg
gtgtccaaattcgtcgtacatttgttagtagaaggttattctaatgcaaacaaatgttcc
aatggcggaagaggtttgatgcagctggattataggcaattatttgtgaaattagagaag
atatctggcctcaagcctattccgtaccaagattatgtagataggtacgtgaaagcgtat
tatttgcccaggaaaggtctagaagactttgtgagagaaaggactgagtattcaaataaa
catttgttggctttagtggcttcagcatgtgagaataagagagataggcaagctttggct
gctataattgagggtagagatgctgcgtag
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