Amyelois transitella (navel orangeworm): 106130109
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Entry
106130109 CDS
T09957
Name
(RefSeq) H/ACA ribonucleoprotein complex subunit 4
KO
K11131
H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
atra
Amyelois transitella (navel orangeworm)
Pathway
atra03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
106130109
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
atra03009
]
106130109
03032 DNA replication proteins [BR:
atra03032
]
106130109
Ribosome biogenesis [BR:
atra03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
106130109
Prokaryotic type
106130109
DNA replication proteins [BR:
atra03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
Dyskerin complex
106130109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DKCLD
TruB_C_2
TruB_N
PUA
UPF0113
Motif
Other DBs
NCBI-GeneID:
106130109
NCBI-ProteinID:
XP_013184329
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All DBs
Position
31:complement(2574660..2576180)
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AA seq
506 aa
AA seq
DB search
MTEVLQPGAEVFSEKKKKKNKETVTLGAFQKLGDFKIEPSESVGKLDTAYWPLLLKNFDR
LNVRTNHYTPLPFGHSPLKRPITDYIKSGFINVDKPSNPSSHEVVSWIKRILKVEKTGHS
GTLDPKVTGCLIVCIDRATRLVKSQQNAGKEYVAVFSLHSAVESIQKVTQGLEKLRGALF
QRPPLISAVKRQLRVRSVYDSKLLDFDQEKNIGVFWVSCEAGSYIRTMCVHLGLMLGVGG
QMIELRRVRSGIQGEKEGMVTMHDILDAQWAYENHKDETYIRRVIKPLEGLLIAHKRIFI
KDSAVNAVCYGAKVLLPGILRYEDGIEVDQEIVIVTTKGEAVALAIALMTTSTMASCDHG
VAAKLKRVIMERDTYPRKWGLGPKASQKKQLIQQGKLDKHGKPNENTPAEWLNSYVDYKV
KKEPENGDAEEGSRKRTASTANADDLNNSTEAKSEKKKKKKKRDQEEGAGDATMETDVTT
EAADDSVRKEKKKKKKKDRDQERTDE
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagttctgcaaccgggtgcggaggtgttctcggagaaaaaaaagaagaaaaac
aaggaaactgtaactctcggtgcgtttcagaagcttggagactttaaaattgagccctcg
gaaagcgtgggtaagttggatacggcgtactggccgcttttgctgaagaattttgaccga
ctcaatgtgcgcactaaccactacacgcctctgccgttcggccattctccattgaagcgt
ccgatcaccgattatatcaaatctgggttcataaacgtcgacaaaccgagcaaccctagt
tcccacgaagttgtgtcatggataaaaaggattttgaaagtggaaaaaactggacattca
ggtacccttgatccaaaagttactggatgtcttattgtatgtattgaccgtgctacaagg
ctagtgaagtcacagcagaacgctggaaaagagtatgttgctgtattcagtttgcattcc
gctgtggagagtattcagaaagtgacgcaaggtttagaaaagctacgtggagctttgttc
cagcgacctcctttaatatctgctgttaagagacagctccgagttcgtagtgtgtatgac
agtaaattactagattttgaccaggagaagaatattggcgtgttctgggtgagttgtgag
gcaggatcctacattcgtacaatgtgtgtccacctgggacttatgcttggtgtaggcgga
cagatgatagagctacgacgtgtccgttctggtattcaaggagaaaaagaaggcatggtc
acgatgcatgatatattagatgcacaatgggcatatgaaaatcataaagatgaaacttat
attcgtagagttataaagccattagagggtttgctcatcgcacacaagaggatattcatc
aaagacagtgctgtcaatgctgtgtgctacggggcgaaagttttgttgcctggaattttg
aggtacgaagatggcattgaagtagatcaggaaatagttatagtgaccacgaaaggagaa
gctgtggctctggctattgctttaatgacgacatccacaatggcgtcttgcgatcacgga
gtggcagctaaattaaaacgcgttatcatggaaagggacacatatcctcgcaaatggggt
ctcgggccgaaggcttcacagaaaaagcagttgatacaacaagggaaactggataaacat
ggcaaacctaatgagaatacaccagcagagtggttaaacagttacgtagactacaaagta
aagaaggagcctgagaatggagacgcagaggaaggcagccggaagagaacggccagtaca
gcaaatgcagatgatttaaataattcaacagaagctaaatctgagaagaagaagaaaaaa
aagaagcgtgaccaagaagaaggtgccggtgatgccactatggaaacagatgtgacaact
gaagccgcagatgattccgttcgtaaagagaagaaaaagaaaaagaagaaggacagagat
caagagagaacggacgagtaa
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