KEGG   Amyelois transitella (navel orangeworm): 106130110
Entry
106130110         CDS       T09957                                 
Name
(RefSeq) probable tyrosyl-DNA phosphodiesterase isoform X1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
atra  Amyelois transitella (navel orangeworm)
Pathway
atra03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:atra00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    106130110
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:atra03400]
    106130110
DNA repair and recombination proteins [BR:atra03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     106130110
SSDB
Motif
Pfam: Tyr-DNA_phospho zf-CCHH
Other DBs
NCBI-GeneID: 106130110
NCBI-ProteinID: XP_060809335
LinkDB
Position
31:join(2810420..2810456,2810532..2810630,2810944..2811085,2811766..2811974,2812643..2812822,2814334..2814559,2815619..2815714,2816279..2816449,2816798..2816966,2818008..2818110,2818872..2818971,2819349..2819559,2820490..2820612)
AA seq 621 aa
MNTPNKRRSTMEDNNKPKRVKKECSYGEKCYRLNPAHFREFSHAHLESILDNYSGSGEFP
IPDKYVHQKHMVSDQLNVIIEKKFYEPAEIQKSDNTKPQSDTPEQSSSKGTGYSEAEQQD
RKVVKPESDPKNGESTSSSLKVEKLSEKRKSPTNMEKQSTKSSTDYQPIVEPSRRPESFL
KVVLPKGNMLAKHAASAPYHIFYTTIADAKETHSQPYSITFLEILDRSLGELKCSLQINF
MVEIGWLLAQYYFAGYSNKKLTILYGEEMEDLKTINKKKPHVDAHYVSMPTPFGKHHTKM
MILCYEDGSLRVVISTANLYLDDWENRTQGLWFSPNCPELPADAMPFEGDSPTGFKKSLL
RYLNHYHMPHLAWYIERVKRCDFSHINVFLIASAPGSHFDLDWGMTRVGALLRQHCCVPP
DENRKWPLVAQASSIGSYGKEPKLWLTGDFLHHFTKIKNQSQLLSTPPELKVIYPSLENV
RQSHDGLLGGGCLPYAADAHAKQTWLKDYLYQWKATRSYRNRAMPHIKSYIRPSPDHKMA
AYYLLTSGNVSKAAWGSVNKGNSALRLMSYEAGVLFLPRFVINEDFFPLDLNADNPLVVP
YDLPPTKYTDDMTPWVSDYLR
NT seq 1866 nt   +upstreamnt  +downstreamnt
atgaacactcctaataaacgtcgaagcacgatggaagataacaacaagccgaagagagta
aagaaagaatgtagttatggtgaaaaatgctataggttgaatccggctcatttccgcgag
ttcagccatgcccatttggagtcaatcctggacaactacagtggttccggagaatttccc
attccggacaagtatgttcaccaaaagcatatggtttcggatcaactgaatgttattatt
gagaaaaagttttatgaaccagctgaaatccagaaaagcgataatacaaaaccacagagt
gatacacctgaacaaagtagttctaaaggtacaggttatagtgaagctgaacagcaagac
agaaaagtggtcaagccggagagtgatcctaaaaacggagaaagtacaagcagtagttta
aaagttgagaagttgagtgagaagaggaagtctcccacgaacatggaaaaacagagtact
aaatcaagcaccgactaccaacccatagtggagcctagcaggcgtccagagagtttcctg
aaggtggtgctcccgaaaggcaacatgctggccaagcacgccgccagcgcgccctaccac
atattctacacgaccatagcggacgcgaaagagacgcacagtcagccttactctatcacg
ttcttagaaatactagaccgcagtttgggtgaactcaaatgctcgttacaaataaacttt
atggtcgaaatcggttggctgttggcgcagtactactttgccggttacagcaacaaaaag
ctgactatactctatggcgaggaaatggaagatttgaagaccattaacaagaagaagccg
cacgtggatgcgcattatgtgtctatgcccactccatttggcaaacatcatacaaaaatg
atgatactgtgctacgaagatggatctttgagggtagttatatccacggcaaatctttat
ttggatgactgggagaacaggactcaggggctctggttcagtccaaactgcccggaactg
cccgcggacgctatgcccttcgaaggggattcccccaccggtttcaagaagagcctgctg
cggtacctcaaccactaccacatgccgcacttggcgtggtacatcgagagggtgaagcgg
tgcgacttcagccatatcaacgtgttcctaatagcgtcggcccctggctcccacttcgac
ctggactggggcatgacccgcgtcggggctctgctgcggcagcactgctgcgtgcccccc
gacgagaacaggaagtggccgctcgtagcccaggccagcagtattggcagctatggtaaa
gagcctaagctgtggctgaccggcgacttcctccaccacttcaccaagataaagaaccag
tcgcagctgttgtccacgccgccggagctgaaggtcatctatccgtcactggaaaacgtc
cgtcagtcacacgacggtctgctcggcggcggctgcctgccttacgctgcggacgcgcac
gctaaacaaacatggctgaaagattatctataccaatggaaagcaacgcgcagctacagg
aaccgcgcgatgccccacataaagtcgtacatccggccgtcgccggaccacaaaatggcc
gcctactacctgctgacatccggcaacgtcagcaaggcggcgtggggctccgtcaacaag
ggcaactccgcgctgaggctcatgagttacgaagctggcgtcttgttcctgcccagattt
gtgattaacgaagacttcttcccgctggatctgaacgcggacaatcccctggtggtcccc
tacgacctccctccaacgaagtacacggatgacatgacgccgtgggtgtcagactatctg
cgatag

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