Amyelois transitella (navel orangeworm): 106130111
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Entry
106130111 CDS
T09957
Name
(RefSeq) spastin isoform X2
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atra04131
]
106130111
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
atra04812
]
106130111
Enzymes [BR:
atra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
106130111
Membrane trafficking [BR:
atra04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
106130111
Cytoskeleton proteins [BR:
atra04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
106130111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
RuvB_N
MIT
AAA_22
TIP49
AAA_5
AAA_16
Mg_chelatase
NPHP3_N
nSTAND3
AAA_19
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
106130111
NCBI-ProteinID:
XP_013184351
LinkDB
All DBs
Position
18:join(7716464..7716926,7717995..7718165,7719053..7719220,7722996..7723183,7729732..7729923,7730305..7730419,7730922..7731064,7731609..7731799,7732458..7732657,7733173..7733336)
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AA seq
664 aa
AA seq
DB search
MVSGDDSNGGRLSRKTARSPNRKCKKTDANIAKGSALRNDAQPSVHKRNLYVVSFPIIIL
FNVLRSILYQLFIIFKYLYSASNRLMHKPRKSGECNLEVVVKDGVVSTEVIHSEEMAHIH
NVGPGDPLLAKQKHHHRKAFEYISKALKIDEENEGQKELAIELYKKGIYELERGIAVDCW
GGRGDAWQRAQRLHDKMKTNLGMAKDRLHFLANLVALSKLGVESDSERHDKRPTESPLKV
RRPLEKSKTTLLAHTESNSGHTKPSNEVAGRKLTTGGRRVPSGGGPLMKSQTLPRSMGRS
SSQPNSSNGSYSRYPVKPASTPPAVKRQLSVPANGSPIRRAVGGGSQRGTPTRSRTPQPP
LSVRGVDPKLVQLILDEIVEGGPKVHWEDIAGQEAAKQALQEMVVLPSLRPELFTGLRSP
AKGLLLFGPPGNGKTLLARCVAAECSATFFSISAATLTSKYVGDGEKMVRALFQVARELQ
PSIIFVDEVDSLLCERSSGEHEASRRLKTEFLVEFDGLPAAGADRLIVMAATNRPQELDE
AALRRFPKRVYVSLPELRTRSCLLRRVLARGSAASALTDDEIERLAALTDGYSGSDLTAL
ARDAALGPIRELDPEEVKCLDLSLVRSITFQDFMDSLKRIRASVSPLSLVAYEKWSVQYG
DLGL
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggtttcgggtgacgattccaatggtggtcgattatcccgcaagactgcaagatcccca
aatcgcaagtgcaaaaagacagatgcgaacatagcgaaagggtctgcgttgcgaaatgat
gcgcaaccctcggttcataaaaggaatctttacgttgtttcgttcccaattataatcctg
tttaacgtactcaggtcaattttgtatcagttattcataatttttaagtatttgtattcg
gcgtcgaatcgtttgatgcacaagcctcgtaagagcggggagtgcaacttggaagtggtg
gtgaaggacggtgtggtatctacagaggtcatacatagtgaagaaatggctcacatacac
aatgtgggccccggagaccctcttctagcaaagcagaagcatcaccatcggaaagctttt
gagtacatatcaaaagctctcaagattgatgaagaaaatgagggtcaaaaggagttagca
atagagttatacaagaaagggatctatgagttggagcgaggcatcgccgtggactgctgg
ggcggccgcggcgacgcctggcagcgggcgcagcggctccacgacaagatgaagacaaac
cttgggatggccaaagatcgcttgcacttcctcgcaaacctagtggctctcagtaaattg
ggagttgagagcgattccgaacgacacgacaaaaggcctacggagtctccgctaaaggtg
cgcaggcccttagaaaagtcgaagactacgttactcgcgcatacagaaagtaacagtggt
catacgaagccatcgaacgaagtagccggccgcaagttgaccacgggcgggcgtcgcgtc
cccagcggtggaggtccccttatgaagtcacagacgttaccacgctcaatgggccggtcg
tcatcgcaacccaacagctccaacggcagctacagcagatacccggtcaagcccgcgtcc
accccgccggctgtgaaacggcaactttctgtgccggcgaacgggtctcctatccgccgg
gcggtgggcgggggctcgcagcgggggacccccacgaggagtcgtaccccgcagcccccg
ctgtctgtcagaggagtggaccctaagctggtgcagcttattttggacgagatcgtggag
ggggggccgaaggttcattgggaggatattgcggggcaggaggccgctaaacaagctcta
caagaaatggtggtgttgccatctctaaggccggaactattcacgggattgaggtcacca
gcgaagggattgttgttgttcggacccccgggaaatggtaaaacgctgctagcgcggtgc
gttgcagccgaatgttcagctacgttcttctccatttcggccgccactcttaccagcaaa
tacgtcggtgacggtgagaaaatggtgcgggcgctgtttcaagtcgccagagagttgcag
ccatcaataatattcgtggacgaggtggattccctcctctgcgagcgttcgtctggcgaa
cacgaagcgtcaaggagactgaagacggaatttttagtggaattcgacgggttacccgcg
gcgggagctgataggctgatcgtaatggcggctaccaatcggccgcaggagttagacgaa
gcagctttaagacggtttccaaaacgggtttatgtatcgttaccagaactgcggacacgg
tcgtgtttattgagaagagtgctcgcgcgcggttcagcggcttcagcgctcactgacgac
gaaatagaacgacttgcagcgcttactgatggatattcaggcagcgatctcactgcgctg
gcgcgggacgccgctttgggacctatcagagagctagacccagaagaggtcaaatgcctg
gacctgtccctggtgcggagcatcacgttccaggacttcatggactccctgaagcggatc
cgcgcgtccgtgtcgccgctgagtctggtcgcgtacgagaagtggtcggtccagtatgga
gacctgggactatga
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