Amyelois transitella (navel orangeworm): 106130318
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Entry
106130318 CDS
T09957
Name
(RefSeq) nuclear valosin-containing protein-like
KO
K14571
ribosome biogenesis ATPase
Organism
atra
Amyelois transitella (navel orangeworm)
Pathway
atra03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
106130318
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
atra03009
]
106130318
Ribosome biogenesis [BR:
atra03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
106130318
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Nucleolin_bd
AAA_16
RuvB_N
AAA_22
AAA_5
TIP49
AAA_33
AAA_14
nSTAND3
RNA_helicase
NPHP3_N
AAA_28
Mg_chelatase
Vps4_C
AAA_18
AAA_17
AAA_2
NACHT
ABC_tran
IstB_IS21
TsaE
AAA_7
AAA_3
ATPase
AAA_11
Parvo_NS1
Rad17
Zeta_toxin
NB-ARC
Sigma54_activ_2
Motif
Other DBs
NCBI-GeneID:
106130318
NCBI-ProteinID:
XP_013184590
LinkDB
All DBs
Position
15:8768798..8771398
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AA seq
866 aa
AA seq
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MKKHQTRQKTMNDPVIVSRVKNYLAENVDKTFVDVSQMARSLKERYREYSNRSDTAFCQL
VESAYKVVLQSYGLDGASTSEGSEEESDLELLDENNSVLNDRLLTMYKMQDKKRPAATRR
ATDKSGEPIDILSSDEDGSAAPKLPKINDQITITPHIPIRNANSTSVDPSRSHQNMHTGD
RKRKVDVNKIAPIKKKYDVATKNVKVSFEDIGGISEVITQICDLVLHMKHPEVYNQLGIK
APRGALLHGPPGTGKTLLAHAIAGKLQLPLIAVTGTELVGGVSGESEERIRELFEKAVSI
APCVLFIDEIDAVCGNRVNAQKDMEKRMVAQLLASLDNLGESNSSVLILAATNNPDALDP
ALRRAGRLEQEITLGIPSLKARKEILTILCKSIALSDDIDLNTIAQITPGFVGADLQALV
NKASTYAVKRIFAEIKATSLKNELAEKQKNNDEVSVIPNGEKEKEEAPKDAAESDGTAPE
ENVVEEAKPESQAPAINTEIPPVEGNHIDNSTSNAETADPVNDVVSLLEDSMPYSSEELE
GLAIRQEDFLKALKTTKPCAVREGIVTVPDVTWDDVGSLNQVRKDLQLAVLAPVKYPEQL
KKLGLAAPSGVLLCGPPGCGKTLLAKAVANEAGVNFISVKGPELLNMYVGESERAVRTCF
RRARNSAPCVIFFDEFDALCPRRTSQDHNGAARVVNQLLTEMDGIESREGVFVLAASNRP
DIIDPAVLRPGRLDRVMYVGMPAREDRLDIIQKLTKGGTQPQLGPDVDLQVIAGLTDGYT
GADLAGLVKAAATNALTLHIENGTMDEDIFVSFEDFRAALAKCKPSVSTKEQLHYEKLRI
KYASGADDKDMEMETEPTNEESMDTV
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaacatcaaactcggcaaaagacgatgaacgaccccgtgattgtgtcgcgtgtg
aaaaattaccttgctgaaaatgtagacaagacttttgtcgatgttagtcaaatggcgcgt
tctctcaaagagcgctaccgcgaatatagtaatagaagtgataccgctttctgccagtta
gtagaaagtgcttacaaagtggtattacaaagctacggacttgacggagcgtctacatcg
gaaggttccgaggaagaatccgacctagagctgttggatgaaaacaacagcgtattgaat
gatcgtttgctaactatgtataaaatgcaggataaaaaacgtccagcagccactcgtcgg
gcgacagacaagtccggtgaaccgatagacatacttagcagtgacgaagacggctccgcg
gcaccaaaactaccaaaaattaacgatcagataaccataacccctcacataccaataaga
aatgcaaacagcacttcagtggacccttccagatcacatcaaaatatgcataccggtgat
agaaagcgaaaagtggatgtaaacaaaattgcaccgatcaaaaagaagtatgatgttgct
acaaagaatgttaaggttagtttcgaagacattggtggtatatcggaagtaattacacag
atttgtgatcttgtgctgcatatgaaacaccctgaagtttataaccagttaggtataaag
gcacctagaggggctttgttacatggtccgccaggcactggtaaaacattgttggctcat
gcaattgctggtaagttacaattgccactcatagctgtgactgggacagaattggttggg
ggagtatctggagaatcagaggagcgcattagggagctatttgagaaggcagtgtccatt
gccccctgtgtgttgttcattgatgagattgatgcagtatgtggcaatagagtaaatgct
cagaaagacatggaaaaaagaatggtggctcagttattggctagtttagacaatttggga
gaaagtaattcctctgtactcattcttgctgctacaaacaatcctgatgccttagatcct
gccttgagaagagcaggacgtctcgaacaagagattacattaggaattccatcattgaag
gcaagaaaagagatcctcacaattttgtgcaagagcatagctttaagtgatgatattgat
ttgaataccattgcacaaataacaccaggttttgttggagctgatttacaagcattggtg
aataaagcaagcacttatgcagtaaaacggatctttgccgaaatcaaggctaccagctta
aaaaacgaattggcagaaaaacaaaaaaataatgatgaggtctctgttataccaaatggt
gaaaaggagaaggaagaagcaccaaaagacgctgcagagtctgatggaactgccccagaa
gaaaatgttgtagaagaagctaaacctgaatctcaagctccagcaataaatactgaaatc
ccacctgtggagggtaaccatatagacaatagtacaagtaatgcagagactgcggaccca
gttaatgatgtggtcagtcttctggaagattctatgccatacagttcagaagaacttgaa
ggtcttgccattagacaggaagattttttgaaagctcttaaaacaaccaaaccatgtgct
gtcagagaaggtattgtcactgtcccagatgtgacatgggatgatgttggttctttgaat
caagtccggaaagatttacaactcgcagttttagcaccagtaaagtatcctgaacagtta
aagaagctgggattggctgcccccagtggggttttgctttgtggacctcctggttgtggt
aaaacattattagccaaagctgtagcgaatgaggcaggtgtaaattttatctctgtaaaa
gggcccgagttgctcaatatgtatgttggtgagagtgaaagagcggtaagaacttgtttt
agacgcgcacggaattctgcaccttgtgttatattctttgatgaatttgatgctctttgt
ccaagacgtacttcacaagaccataacggagctgcaagggtagtcaaccagctgttgaca
gaaatggatggtatagagagcagagaaggagtttttgtgttggctgcttctaacagacca
gatatcattgacccagcagtgctaagaccgggccgtttagatcgcgtcatgtacgtgggc
atgccagcaagggaggatagacttgatataatccaaaaattgactaaaggtggtactcag
ccacagttaggtcctgacgtggatttgcaagtgattgccggcctcacagatggttataca
ggtgcagacttggcaggattagtcaaggctgcagctacaaatgctttaactctgcacata
gaaaatggtactatggatgaagatatatttgtttcatttgaagattttagagcagctctt
gccaaatgcaagccttccgtgtccactaaggagcaactgcattatgagaaattaagaatt
aaatatgcttctggggctgatgataaagatatggagatggagactgaaccgactaatgag
gaatctatggatactgtgtga
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