KEGG   Amyelois transitella (navel orangeworm): 106130405
Entry
106130405         CDS       T09957                                 
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
  KO
K10601  E3 ubiquitin-protein ligase synoviolin [EC:2.3.2.27]
Organism
atra  Amyelois transitella (navel orangeworm)
Pathway
atra04120  Ubiquitin mediated proteolysis
atra04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:atra00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    106130405
   04120 Ubiquitin mediated proteolysis
    106130405
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:atra04121]
    106130405
Enzymes [BR:atra01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     106130405
Ubiquitin system [BR:atra04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    106130405
SSDB
Motif
Pfam: zf-RING_2 zf-rbx1 zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX zf-RING_11 zf-C3HC4_3 zf-RING_16 zf-RING_5 zf-ANAPC11 Endonuclease_7 zf-RING-like zf-Nse Prok-RING_4 zf-C3H2C3
Other DBs
NCBI-GeneID: 106130405
NCBI-ProteinID: XP_060805147
LinkDB
Position
18:complement(join(5467893..5467962,5468461..5468559,5469036..5469154,5469484..5469608,5469987..5470196,5470738..5470880,5471135..5471319,5471894..5472088,5473466..5473618,5474303..5474395,5474900..5475028))
AA seq 506 aa
MKAILATVISLALTTVVIGNAYYQKKQFYPSIVYLTNSNPSMAVMYLQAFILVLLLGKLL
RKIFFGQLRPAEFEHLIERSWYAITETCLAFTVFRDDFNPKFIALFTLLLFLKAFHWLAE
DRVDYMERSPVIGLVFHVRILSLLMLLAHADFYFIHHAYQFTTAKGPSVQLVFGFEYSIL
IIMIANILIKYVLHAIDSRWEAPWESKAAVLLYTELAINFLKVLLYIGFVAVMVRIYTLP
LFAFRPMYETMRSFKKAYNDVVLSRRAIRNMNTLYPDATPAELAAADNECIICREEMHTG
AKKLPCNHIFHAACLRLWFQRQQTCPTCRLNVLRAPAPEPPPAAPAAPPRAAPHAAPAGP
PPFPNMPPPPMMAWGMPPPPPPRPASLATLTTAELQRMEGTERRNIEARLQLLREIEAML
DASVLLMQQYSSVVANLPQNSVTVATQTETIKTEAPLSSPSAAAGPSFKPQPGPPPAEAS
SSTRDKTDADAEELRRRRLQKFTQDK
NT seq 1521 nt   +upstreamnt  +downstreamnt
atgaaggcgatccttgctactgtgatcagtcttgcactgacgactgtggtcattggcaat
gcatattaccaaaagaaacaattctatccttctatagtttatttaacgaattccaatcct
agtatggctgtaatgtacttgcaagcgtttattttagtattattgttaggtaagctactg
aggaaaatattctttggacaacttcgccctgcagaatttgagcatttaatagagaggtca
tggtatgcaatcacagagacgtgcctggcgttcacagtttttagggacgacttcaaccca
aagttcattgcccttttcaccctgctcctgtttctcaaggcattccactggctagctgaa
gatagagttgattatatggaaaggagtcctgtcattgggttagtgttccatgtacgaatc
ctatcgctgctaatgttactggcgcatgctgacttttacttcattcaccatgcgtaccag
ttcaccacagccaagggtccttccgtgcagctggtcttcggctttgaatacagcatactg
attatcatgattgccaacatcctaattaagtacgtcctccacgccatcgactcgagatgg
gaagcgccgtgggagagcaaagcggcggtgctgctgtacacggagctggccatcaacttc
ctcaaagtgctgctgtacatcggcttcgtggccgtcatggtcaggatctacactctaccc
ctgttcgcattcaggcctatgtatgagactatgaggagtttcaagaaggcgtacaacgac
gtggtgttgtcaaggcgcgcgatccgcaacatgaacaccctgtacccggacgcgacgccc
gcggagctggcggctgccgacaacgagtgcatcatatgtcgggaggagatgcatactggt
gccaaaaaactgccgtgcaaccacatattccacgcggcgtgcctccggctgtggttccag
cggcagcagacctgccccacgtgccgcctcaacgtgctgcgcgcgcccgcgcccgagccg
ccgcccgccgcgcccgccgcgccgcctcgggccgcgccgcacgccgcgccggctggccca
ccgccgttccccaatatgccgccgccaccaatgatggcgtggggcatgcctccgcctccg
ccgccgcggccggcctcgctagcgaccctgaccactgcagaattacaacgaatggagggc
accgagagaagaaatattgaggctcgcttgcagcttctccgagagatcgaggccatgttg
gatgcgtcagttctcctcatgcagcagtactcctccgtcgtggctaatctgccacagaac
agcgtgacggtggctacccagactgaaactattaaaacggaggcgccgctctcgtcgccg
agcgcggcggcgggtccctcgttcaagccgcagcccggaccgcctccagctgaagcttct
tcttctactagagacaagactgatgctgatgccgaggagctgagaagacgacgattacag
aagttcacacaggacaaatga

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