Amyelois transitella (navel orangeworm): 106130431
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Entry
106130431 CDS
T09957
Name
(RefSeq) thyroid receptor-interacting protein 11 isoform X1
KO
K23368
thyroid receptor-interacting protein 11
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atra04131
]
106130431
Membrane trafficking [BR:
atra04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
106130431
Retrieval pathways
106130431
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GRAB
CCDC39
ATG16
DUF4473
TMF_DNA_bd
PKcGMP_CC
GRIP
PG_binding_5
Motif
Other DBs
NCBI-GeneID:
106130431
NCBI-ProteinID:
XP_013184726
LinkDB
All DBs
Position
27:join(4023776..4023946,4030370..4030423,4067442..4070522,4070636..4070820,4071116..4071279,4071474..4071677,4075427..4075571,4076344..4076570,4077134..4077348)
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AA seq
1481 aa
AA seq
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MSWLNLNQSLNSLKGQITSFATEVLSDVPVQDSDGSSSKSDAPVGDLVEKCRAQELENAS
LKKLVEELQATLESERHSRKNGVKEDDSNWYWDPPAQSSEPTDVENQYKNQIRTLQDEIS
SIKERSTIDLRPEREEVGRLREENQNLTSSLEELDSQHQMAMERLLSLKKELQTNFEVLK
KEHEELKTSNEEYKTETKHLLNKISERDKEIDNLKNIKSDYETIHHKYQNLERIHSLLRE
NAEKFQEENQELHEEVFKLQEQVTKLEHDMELMTKRSELSDFVSREQYDNVVKELNDLKG
RSTPDILDLDEINIDDNAKGVIESLKREIHELKHKLSLKELENGDHYDNKVIKSDKILQL
YNKYVDFELPVDYVGEIPSAGDNVVLYKLESVFKTLYSLKKEVDSVKYELSQKKSNINHL
QSQIDELTNENDFLTTDINHFERELSETKKNNDFLISELAALKNTSKLEPIIESHEDNLA
KLETELADSNRINKTFESEINRIKKQLIEVNEEKVGLQKSLSDLKEKYTTMLSEIEMCKN
QTKAIEELENTTNTEMSVKLKNTTDEVDDLKKRLSTANSKNEQLSIDIHIIENDKVLLTK
AVDDLKNALSEKSSEHKELEVLKIALDNKLHDLEVKLDEVIKHKLEIEQERNKLEETVAK
LRYELSSKDATETEFNKDSMEIVLQEKLDQLSKENMSLLEGRENVTLLEQSIEELKGKLL
QQDFLSNEIIVLKEENQRLLERKLQLEAELSATDTKIVGLEQEFDKLINDVNEKDTLIDA
LNLTIVKNSETLQALNQNVKDLENSVAVKNDEINKLRQTIETVQNQFSETSQKSNIYQNE
LSKIHNDKEEVTKQMIMMSEEINAKNTEISNLTVKLHEQENLCLEYKNVIDSKDKDIKEL
NQSIVELTDKLKTTDNFTDHNDEYMRLVQEKNAIETSLKKSVEEKEKELKDLKDGLQNLE
KTCSEYKSMLDNTMIEKNELMSFVTLKHNESVQYHTEIQRLNQAILEQTNEFKNIIEEKE
RQIHNRSEYCANCEAVRVTLKEKDEIIKNMNQNVSGCIDTVKAELSEANKTISILTEERD
NLSQTLAYQIETVKTLKAEILQLTEQEQNSTRELERLRHHLVELEENYTQELMTSEQKLT
ECQTRLNQVEERAKQNSTVYTSNSIRANQEVETLRNQIKLLEKQREDVQVKLSEAEDARS
KSEAALTNLQVVLEQFQLDKERDIQTATEKIRNKMEDMKLENVALNEEISRLGMKLEESL
AGLRAATRLGDQVETKTAQINDLKEQVRTLQISVAAAEERYHNAISNQQDRVDKNLVKNL
LINYVLASSQSVQNRTRVLKILSTVLDFNQQECEKLGLSRSTNPSDGIAAEFVKFLENES
KPRAPLPSMMNLGQNTSRSSTPPSRKSSMMGPNPYEVGHKRNPSTGSNNLLFQNIDSVET
SSQISIESDHREPRVVTQLDTGVNQTRNTEGAILKHVLKDM
NT seq
4446 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtggttgaacttaaatcagagtctgaacagcttgaaaggacagattacaagtttt
gctaccgaagtgttatcggatgttcctgtgcaagattccgatggaagttcttcgaaatca
gacgccccggttggagatcttgtagaaaaatgtcgtgcccaggagctggagaatgcttca
ctcaagaagttggtagaagaactgcaggctacgttggaatctgagagacactccagaaaa
aatggcgttaaagaagatgactccaattggtactgggatccaccggcccagtcatcagaa
ccaactgatgttgagaaccaatacaaaaatcaaatccgaactctacaagatgaaatatcc
tccataaaagaacgaagtaccattgacttgagacccgaaagagaagaagtaggccgtcta
cgcgaagaaaaccagaatctaacgagcagtttggaagaactagatagtcaacatcaaatg
gcaatggaacgacttctatctcttaagaaagaacttcagacaaattttgaggtcctgaaa
aaagaacacgaagaattaaaaacatcaaatgaagaatataaaactgagactaagcactta
ttaaataaaataagcgaaagagataaggaaatagataatcttaaaaacattaaatcagat
tacgagacaatacatcataaatatcaaaatttggaaagaattcacagccttcttagagag
aacgcagaaaagttccaagaagaaaaccaagaactacatgaagaggtcttcaaactgcag
gaacaagtcactaaattagaacatgatatggaacttatgactaagcgttcagaattatct
gatttcgtctccagagaacaatatgataatgtagtgaaagaattaaatgatttaaaaggt
agaagtacccctgatatattagatttagatgaaatcaatatagatgataacgctaaaggt
gttattgagtctttgaagcgagaaatacatgaattgaaacataaattgtctctcaaggaa
cttgagaatggcgaccactacgataataaagttataaaatcagataaaatcctgcagtta
tataacaaatatgttgattttgaactccctgttgattatgtcggtgaaataccatctgct
ggtgataatgttgtactttataaattagaatctgtgttcaaaactttatactccctcaaa
aaagaggtcgactcagtaaaatatgaactctcgcagaaaaaaagcaatataaatcattta
cagtcacaaatagatgaattgaccaatgaaaatgattttcttactaccgatataaaccat
tttgaaagagaattgagtgaaacgaaaaaaaataatgattttcttatatctgaacttgct
gccttaaaaaatacgtccaagttagagcccattattgaatcacatgaagataatttagca
aagttagaaacggaattagctgattctaatagaataaacaaaacttttgaatcagaaata
aatagaattaaaaaacaattaattgaggtcaatgaggaaaaagtgggtcttcagaaaagt
ttaagtgatctcaaagaaaaatatactaccatgttgtcagaaattgaaatgtgtaaaaat
caaacaaaagcaattgaagaattggaaaatactactaatacggaaatgtctgtcaaattg
aaaaatactacagatgaagtggatgatttgaaaaagcgtttgagtacagctaattctaaa
aatgaacagctttccatagatattcacattatagaaaatgacaaagttttattgacaaaa
gcagtagacgacttgaagaatgctttgagtgagaaatcctctgaacataaagaacttgaa
gtacttaaaatagctttagataataagttacacgatcttgaagtcaaacttgatgaagtg
ataaaacataagttagaaatagagcaagaaaggaataaattagaggaaacagttgccaaa
ttgcggtatgagttatcttcaaaagatgctacagaaacagaattcaacaaagacagtatg
gaaattgtattacaagagaaattagatcaactttcaaaggagaatatgtctttgttagaa
ggtagggaaaatgttacattgttagaacaaagtattgaagaactgaaaggaaaattactt
caacaagattttttgagtaatgaaataatagtattgaaggaagaaaatcaaagactcctt
gaaagaaaacttcaactagaggcagaattgtccgcgactgatacaaaaattgttggttta
gaacaagaattcgataaacttataaatgatgtaaatgaaaaagatactttaatcgatgcg
ctaaacttaactatagtgaaaaatagtgaaactttacaggccttgaatcagaatgttaaa
gatctagaaaatagtgtagctgttaaaaatgatgaaatcaacaaactacgacaaacaata
gagacagttcaaaatcaatttagtgaaactagtcagaaatcgaatatttatcaaaacgaa
ttaagcaaaatacacaatgataaagaagaagtaacaaagcaaatgatcatgatgagtgaa
gaaattaacgcaaaaaatactgaaatatcaaatttgactgttaagttacatgaacaagaa
aacttgtgtttggagtacaaaaatgtgatcgatagtaaagataaagatataaaggaactt
aatcagtctatagtagaattgactgataaattaaaaacaacagacaacttcacagatcat
aatgatgaatatatgagattggtgcaggaaaagaacgcaattgaaacaagtctcaagaag
tcagtagaagaaaaagagaaagagttaaaagatttgaaagacggattacagaacttggaa
aagacatgcagtgaatataaaagtatgttggataatacaatgatcgagaaaaacgaactt
atgagctttgttactttaaaacataatgaaagtgtacagtaccatacggaaatacaaaga
ttgaatcaagctattttggagcaaacgaatgaatttaaaaatattatagaagaaaaagag
agacaaatccataaccgctcagaatattgtgcaaattgtgaagcagtaagggtaactttg
aaggaaaaagatgaaataataaagaatatgaatcaaaatgtcagtggctgtattgatacc
gtcaaagcagagttgtcagaagctaataagacaataagcatcttaactgaagaacgcgac
aatttgagtcaaactttggcttaccaaatagaaactgttaaaaccttgaaagcagaaatt
ttgcagcttacagaacaagaacagaattctacccgtgaattagaaaggctgagacatcac
cttgtagagttagaagaaaactatactcaggaactgatgacatcagaacaaaagctgacg
gaatgtcagactaggctgaatcaggtcgaagagagagccaaacagaatagtactgtatat
actagtaacagcattcgagcaaaccaagaagtagagacgctgcgtaatcaaatcaaactg
ttagagaaacaacgcgaagacgttcaagttaaactcagcgaggctgaagatgcaaggagc
aagagtgaggcggcactgaccaacttgcaagttgttttagagcagttccaattagataaa
gaacgggacatccaaacagcaacagaaaagattagaaacaaaatggaggacatgaaactt
gaaaatgtcgcattaaatgaagaaatctccagattgggcatgaagttagaggaatctttg
gcgggactacgcgcagctaccaggctcggagaccaggtggaaacaaagactgctcagata
aatgatttgaaagaacaagttcgaaccttacaaatatctgtggcggcggctgaggagagg
taccacaacgccatctcgaaccagcaagatcgcgttgacaagaatctggtgaagaattta
ctcatcaattacgtgctggcttcctcgcagagcgtgcagaatagaacaagagtcctgaag
atcctgtcaacagtcctggatttcaaccagcaagaatgcgagaaactcggcctgtccagg
tccacaaacccctcggatggtatagcggccgagttcgtcaagttcttggagaacgagtcc
aagcccagggctcccctgccaagtatgatgaacctgggtcaaaatactagtaggagtagc
acgccgccttctaggaaatcttctatgatgggtccaaacccttacgaagtgggccacaaa
cgcaacccctcgaccggttctaacaacctacttttccaaaacatagactcagttgagacc
tcctcgcaaatatccatagagtctgaccacagagagcctagagtggtcacacaattagac
accggcgtcaatcagacgaggaacacggaaggcgccattttgaaacacgttttgaaggat
atgtga
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integrated database retrieval system
