Amyelois transitella (navel orangeworm): 106130442
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Entry
106130442 CDS
T09957
Name
(RefSeq) F-box only protein 28
KO
K10306
F-box protein 28
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atra04121
]
106130442
Ubiquitin system [BR:
atra04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
106130442
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Gene cluster
GFIT
Motif
Pfam:
F-box-like
F-box
F-box_4
Motif
Other DBs
NCBI-GeneID:
106130442
NCBI-ProteinID:
XP_060807980
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All DBs
Position
27:complement(join(5351511..5351785,5352461..5352574,5353270..5353353,5354315..5354402,5358611..5358726,5359965..5360154,5360643..5360763,5361432..5361559,5363010..5363255))
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AA seq
453 aa
AA seq
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MLFLNLTEDRNIAKKTPLLKKVEKCKHCVRIKWFLNRECEITVILFYIVTDGRIMDLLSL
PVVVLEKIFSYLSYDEIAKNRVVSKTFNEICVGLLNRGFVMIERRHALALKSVKAQLPRR
ESERRYHPLSRHCDILSSIETRISMLNMTYSKFIDTGMCCFIPGKVIDEMRRVLYIVETS
KTPPRAHEVLQELRDISSMAIEHFDDKISPAFRQRLQGVVQPTPKPTQGVLGPLAMRQEL
TQLRRQSMLNAKLALYLAAHYRRFYNRMLEYKRVAWRQRKTIRAMLARQRDQDANIADLK
RRIEECDIKYSELTHTNQAVGGKIASTEVPSSPAQPLRHFGSQIKLDLSVLPIGTSKRGQ
AKLLPNIKPRKPLIRRLPSLSEDEPPKKQAKMDDAQPSTSTQSPRTKTQTTLAKIRGITN
EIRQLSNLSNIDVKLKRSLTAEIETECKKQKLD
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgctatttctaaatttgacggaagacagaaacatcgcgaagaaaacgcctttgttgaaa
aaggtcgagaagtgtaaacattgtgtgagaataaaatggtttttaaatcgtgaatgtgag
ataacagtgatattattttatattgtcaccgacggccgtataatggatctcctatctctt
cccgtcgttgttttagagaaaatcttttcgtatctttcttacgacgaaattgcaaagaat
agagtggtctccaaaacattcaatgagatatgcgtgggcctcctcaaccgtgggtttgtg
atgatcgagcggcgtcacgcgctggccctcaagagcgtgaaggcccaactgcctcgaagg
gagtctgagcgcagataccacccgctgtcgcgacactgcgacatcctcagttcgatcgag
actcgcatctcgatgctcaacatgacgtactccaagttcattgacacgggaatgtgctgt
ttcataccggggaaggtcatagacgaaatgcgtcgcgtcctctacatagtggagacctcg
aagactcccccgcgggcccacgaggtgctccaagagctgcgggacatatccagcatggct
atagagcatttcgacgacaagatctctccggccttcaggcagagactgcaaggggtcgtc
caaccaactcccaaacctacacaaggcgttctcggaccgctagccatgcgtcaggagttg
acgcaactccggcggcagtcgatgctcaacgctaaactagccttgtacctcgcggcccat
tacaggcgattctacaataggatgttggaatacaagagggtggcctggcggcagaggaag
accatccgcgccatgttggccaggcagagggaccaggacgccaacattgcggatctcaaa
cgccgtatagaagaatgcgacataaaatatagcgaactgacacacaccaatcaagctgtc
ggcgggaagattgcttcaacagaagtgccctcgtcccctgcacagcctttacgtcacttc
ggaagccaaatcaagttggacctatcagttttgcccatcggcacttctaaaaggggccag
gctaaattgctgccgaacatcaagccgcgcaaaccgctcatccgccggctgcccagctta
tcagaagacgaaccgccaaaaaaacaagccaaaatggacgacgcccagccttcaacgtct
acgcagagtccacgcaccaagacacaaacgacattagccaagataagaggcattacaaac
gagattcgtcaactgagcaatttgtccaatattgatgttaaactgaagaggagtttgacg
gcggagattgaaacggagtgtaagaaacagaagttggattaa
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