KEGG   Amyelois transitella (navel orangeworm): 106130617
Entry
106130617         CDS       T09957                                 
Name
(RefSeq) coatomer subunit beta' isoform X1
  KO
K17302  coatomer subunit beta'
Organism
atra  Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:atra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:atra04131]
    106130617
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:atra04147]
    106130617
Membrane trafficking [BR:atra04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    106130617
Exosome [BR:atra04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   106130617
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 WD40_CDC20-Fz EIF3I Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_TEP1_C Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_EIPR1 Beta-prop_RIG_2nd NBCH_WD40 WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_LRRK2 Beta-prop_WDR35_TULP_N WD40_RFWD3 MetallophosC Secretin_N_2
Other DBs
NCBI-GeneID: 106130617
NCBI-ProteinID: XP_060809592
LinkDB
Position
Z:join(3105794..3105964,3107669..3107861,3108242..3108390,3108876..3109050,3109669..3109855,3110607..3110740,3111043..3111342,3111526..3111616,3114257..3114422,3114847..3115016,3115239..3115407,3115764..3116025,3116305..3116461,3116678..3116807,3117221..3117402,3118551..3118701,3120288..3120320)
AA seq 939 aa
MFPKPLRLDTKRKLTARSDRVKCVDQHPTETWVLCSLYNGDVNIWNYETHTQIKRFEVCD
LPVRAAKFVPRKNWVITGSDDMQIRVFNYNTLERVHSFEAHSDYVRSIAVHPTQPYILTS
SDDLLIKLWNWDRNWACQQVFEGHTHYVMQIVINPKDNNTFASASLDTTVKVWQLGSSIS
NFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHNQNVSAVSF
HPELPILLTGSEDGTIRIWHAGTYRLESSLNYGFERVWTISSMHGSNNVAIGYDEGTIMI
KVGREEPAISMDVNGGKIIWAKHSEMQQVNLKALPEGTEIKDGERVPVVAKDMGSCEIYP
QTIAHNPNGRFVVVCGDGEFIIYTAMALRNKAFGTAQEFVWAFDSSEYATLENSSTVKVF
KNFKERKSFKPEYGAEGIFGGFMLGVKSISGVAFSFYDWEHLELIRRIEIQPRHVYWSES
GNLVCLATDDSYFVLKYNAAVVTRARETNSNISEDGIEDAFEVVGEVNETVKTGLWVGDC
FIYTNSVNRINYYVGGEIVTISHLDHTMYILGYVAKENRLYLNDKELNIVSYSLLLSVLE
YQTAVMRGDFETADRVLPTIPHDHRTRVAHFLEKQGFKQQALAVSTEPEHQFELALSLGE
LHRAKQLAEEAALAEGAPSRSSAARWSRLGSAAAAAADTELTKLCYQSAQDYSALLLFAA
STGDKQLLQEVARLSAEQGDDNIAFLSYFTLNELDECLNLLIKRDKLPEAAFFARSYIPS
KMCDVVKQWRQSVSAKNTKSGQSLADPEQYENLFPEFAESLELERFQREFGFKHMSQMSN
LPTDSKTCNIERDLAEEMANAIKQGLYTPGTSSLENGPSSSSPTDEDSAQKTHQAPSQQN
SKSKDAIDIMEEIEREIDGIELEASIDSVDLSDEADLMD
NT seq 2820 nt   +upstreamnt  +downstreamnt
atgtttccgaagccgttgagactggacaccaagaggaagttaaccgcgaggtctgaccga
gtcaaatgcgtggaccagcatccaaccgagacatgggttctctgctccttgtacaacgga
gacgtgaacatatggaactacgagactcacacacagatcaaaagattcgaggtatgcgat
ctgcccgtgagagctgcaaagttcgtccccaggaagaactgggttatcacaggttcagat
gacatgcagatccgggtgtttaactacaacactctggagagggtgcactcgttcgaggct
cactcagactacgtcaggagcatcgctgtgcatcctacgcaaccctacattttaactagc
agcgatgatctcctgataaagctttggaactgggaccgcaactgggcgtgccagcaggtg
ttcgagggccacacccactacgtgatgcagatcgtcatcaacccgaaagacaacaacacc
ttcgccagcgccagtcttgacactaccgtcaaggtgtggcagctcggttcgtcaatctca
aacttcacactagaaggtcacgagaagggggtcaactgcgtcgactactaccacggaggc
gacaaaccttacctcataagtggtgcagatgaccgcctcgtcaaaatatgggactaccag
aacaagacctgtgtccagaccttggaaggtcacaatcaaaacgtctccgccgtgtcattc
caccccgagctgccgatcttgttgaccggctccgaagacggtaccatcaggatatggcac
gcgggcacttacaggctcgaatcgtccctaaactacggtttcgaaagggtgtggaccatt
tcctctatgcacggttccaacaatgttgctattggttacgacgaggggaccataatgatc
aaagtgggcagagaggagcccgccatttctatggacgtgaacggaggcaaaatcatctgg
gcgaaacattccgagatgcagcaagtcaacttgaaggctctgcctgagggtacagaaata
aaagatggcgagcgcgtgccagtggtggccaaagacatgggttcctgcgagatttaccca
cagacgatcgcacacaaccccaacggtagattcgtcgtagtttgcggcgacggagaattt
atcatctacacagctatggcgcttaggaacaaggcgtttgggactgcgcaggagttcgtc
tgggccttcgacagttcggaatacgcgaccttggagaactccagtactgtgaaagtgttc
aagaatttcaaggagagaaagagtttcaagccggagtatggagctgaaggtatattcggt
ggcttcatgctgggcgtgaaatctatcagcggagtggcattctccttctacgactgggaa
cacttggagctgataagacgtatcgagatccagccacgccacgtttactggtcggaaagc
ggcaacctggtttgtctggcgacagacgactcttacttcgtgctcaaatacaacgcggcc
gtggtgacccgcgctcgggaaaccaactccaacatttccgaggacggcattgaggacgcc
tttgaggtggttggagaagtgaacgagacagtgaagaccggtctttgggtcggcgactgt
ttcatctacacgaactccgtgaacaggataaattactacgtcggtggcgagatcgtcacg
atatcgcatctcgaccacaccatgtatatcctgggatacgtggcaaaggaaaacagactg
tacctaaacgacaaagagctgaacatcgtgtcctactctctcttgctgtcggtactcgag
tatcagacggcggtgatgcgcggcgacttcgagacggccgaccgggtactgccgaccata
ccgcacgaccaccgtactagagtcgcgcatttccttgagaaacagggtttcaagcaacaa
gcgttagccgtatccacagaaccggagcaccaattcgagctagcgctctccctcggcgag
ttacaccgtgcgaaacaactcgccgaagaagccgccctggccgaaggagcaccgtcgagg
tcatcggccgcgaggtggtcgcgactggggtcagcggccgcggcggctgccgacaccgaa
ctgaccaaactgtgttaccaaagcgcgcaggattatagcgcgctgttgctgtttgcggcc
agtaccggtgacaaacagttactgcaagaagtggcgcggctgtcggccgagcaaggggac
gacaacatcgcgttcctctcatacttcacactgaacgagttggacgagtgtctcaacttg
ctcatcaagagagataagctgcccgaagctgccttctttgccagatcatacattccatcg
aagatgtgcgacgtagtgaaacaatggcggcaatctgtcagcgcgaagaacactaaatct
ggccagtcgctggccgaccccgaacagtacgagaatttgttcccagagtttgcggaatcc
ctagaactggagaggtttcagcgggaattcggcttcaaacacatgtcccaaatgtcgaac
ctacccacagactcgaaaacttgtaacatagagcgcgacctagccgaagaaatggcgaac
gctatcaaacaaggcttgtacacacccggcacatcatccttagaaaacggaccaagcagt
tcttccccgaccgatgaggacagtgcacagaagacacaccaggcgccatcgcaacagaat
tctaaaagcaaagatgcgatcgacatcatggaagagattgagagagagatagacggaatt
gagttggaggcgagcatcgatagtgtggatttgtcggatgaagcagatttgatggactaa

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