Amyelois transitella (navel orangeworm): 106130716
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Entry
106130716 CDS
T09957
Name
(RefSeq) muscle segmentation homeobox
KO
K09341
homeobox protein MSX
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atra03000
]
106130716
Transcription factors [BR:
atra03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
106130716
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
HTH_NDX
Homeobox_KN
TPX2
Motif
Other DBs
NCBI-GeneID:
106130716
NCBI-ProteinID:
XP_013185073
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Position
23:join(3582340..3582754,3598314..3598501,3598878..3599126)
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AA seq
283 aa
AA seq
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MKTSLECERAETAESGGKGRISFSVDSLLRGKADTPVKEASITDANSNDAESTDAAPETD
DSDVDIEDVESNVGDDRDDRDEREMGNDGEEMEGRSGVVVPQPLLPRLYQGHAPPPTWPF
GAFPWMAPNPMFRGGSPNAGPPTGPPVVRCQLRKHKPNRKPRTPFTTQQLLALEKKFRDK
QYLSIAERAEFSSSLRLTETQVKIWFQNRRAKAKRLQEAEIEKLRLSARPLLPPSFALFG
GGGAPPLFAAMAAATRPQLSFLGGPPSHQHAINMNILNSLQPH
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgtcgctcgaatgcgagcgcgccgagaccgccgaaagcggcggcaaaggccgt
atatcgtttagcgttgactctttgctcagagggaaagccgatactccagtgaaagaagcg
agcataactgacgcgaatagcaatgatgcggaaagtaccgacgcggcgccggaaacggac
gatagtgacgtggacatcgaagatgttgagtcgaacgtcggcgacgacagagacgaccgc
gatgagagggagatggggaatgacggggaggagatggagggtcgcagtggggtcgtggtg
cctcagccgctgctgcccaggttgtaccagggccatgcaccgccaccgacctggcccttc
ggagcgttcccatggatggcaccaaaccccatgtttaggggaggctcaccaaatgcaggt
cccccgaccggccccccagtggttcgctgccagctccgcaagcacaagcccaacaggaag
cccaggactcccttcacgacgcagcaactcctggccctagagaagaagtttcgggacaaa
cagtacctgagcatagcggagagagccgagttttcctcgtctttgaggctcacggaaact
caggtaaaaatttggttccaaaatcggcgagctaaagcgaaacggcttcaggaagctgaa
attgaaaaactccgactctccgcgcggcccctactgcctccgtccttcgcccttttcgga
gggggaggcgcgcccccccttttcgcagccatggcagcagccaccagaccccaactcagc
ttccttggggggccgccaagccaccaacacgccatcaacatgaatatactgaactccctg
caaccgcattga
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