KEGG   Amyelois transitella (navel orangeworm): 106130762
Entry
106130762         CDS       T09957                                 
Name
(RefSeq) negative elongation factor A
  KO
K15179  negative elongation factor A
Organism
atra  Amyelois transitella (navel orangeworm)
Pathway
atra03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:atra00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    106130762
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:atra03021]
    106130762
Transcription machinery [BR:atra03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     106130762
SSDB
Motif
Pfam: NELF-A_N DinI VPS13_N
Other DBs
NCBI-GeneID: 106130762
NCBI-ProteinID: XP_060806972
LinkDB
Position
23:join(5766984..5767193,5768414..5768668,5769430..5769607,5770074..5770223,5771085..5771201,5772596..5772705,5773550..5773714,5774316..5774420,5775125..5775262,5775588..5775687,5776228..5776493)
AA seq 597 aa
MANVRDSDTSLWLHNKLGTSNDSWTSGSICTQLNAEVLKNIKDCFPDLQTQVKLKLLLSF
FHIPRRNVEEWRNELEEIIEVAAVDSDLWVAMLAEVLKTFPSAGTLNTEIAEFDETRPIF
SDMIGELRRALAKHSDLGLLPLECLYLNKNALVSVVGQQPNPVKHFTLKRKPKSVALRSE
LLAKATEVQANQKKAQAPTVPVRSRGMPRKMTDTTPLKGLPSRWAARGGRPAPAPRPPPR
AGIKLLDIAEQPATHAQIKKRRKLEMEEGLANKKAPPAAPASPPPDYAKGLNYTLPKPED
TPNTSAAGAPSSPPPPAERAASPAPGAAPAAAPAPLLLQQGTAAKPIVIGQQPKLLIAGQ
AGGKPVLLSAQNLLNTSAVILQPGGKAVLLQNIKSVNQPVVGQPRGVPMPALHTAQAQPQ
QHNLQQIAQTVQLSQPVQQAPAPIPAPQQQQQQQQQQQQQQQQQQPLLPRRGLSLTRDQM
LEAQDMFRNANRVTRPEKALILGFMAGSRDNPCPNLGNIVTIKLSENIENVLQSDDTYLT
MLSEMHFQMNYNNGQWTRLKKYRHIDGMVPQKIPPGSTVIPANSQQPVVSIANQSVS
NT seq 1794 nt   +upstreamnt  +downstreamnt
atggcgaacgtgcgagatagtgatacatctttgtggctccacaataaacttggaacatcg
aatgattcgtggacaagtggttcaatttgtacacaattaaatgcggaagttctgaaaaat
atcaaagattgttttccagatttgcaaactcaagtgaaactaaaattactgctaagtttc
tttcatatcccgcgcagaaatgttgaagagtggagaaatgaattggaagagatcattgaa
gtggccgccgtggactcagatttatgggtggcgatgttggccgaggtcctcaagacgttc
ccctcggccggtacacttaatactgaaatagcggagtttgatgaaacccgtccaatattc
agtgacatgattggagagctgaggagggctttagctaaacattcagaccttggactgcta
cctcttgagtgcctatatttgaataagaatgctttagtttctgtggtaggacaacaaccg
aacccagtaaaacacttcacgttgaagcgcaaaccgaagtcggtggcgctgaggagtgag
ctcttagccaaggcgacggaggtgcaagccaaccagaagaaggcgcaggcgccgaccgtg
cccgtcaggagcaggggcatgccgcgcaagatgacggatactacgcccctaaagggcctg
ccgtcccgctgggcggcgcgcggcgggcggcccgcgcccgcgccgcgcccgccgccgcgc
gccggcatcaagctgctggacatcgccgagcagcccgccacgcacgcgcagatcaagaag
cgcaggaagctggaaatggaggaaggcctggccaacaaaaaggcgcctccagccgccccc
gcgtctccaccaccggattacgcgaagggactcaactacactctgcccaaaccggaagat
acacccaacacgagcgcggcgggcgccccctcgtctcccccgccccccgccgagcgcgcc
gcgtcccccgcgccgggcgccgcccccgccgctgcgcctgcgccgctgctgctgcagcag
ggtaccgcagcaaaacctatagttattggccagcaaccgaaactccttatagcggggcag
gcgggaggcaagccagtgctgctctccgctcagaacctgctcaacacctccgctgtcatc
ctgcagcccggcgggaaggctgtcttgttgcagaacatcaagtcggtgaaccagcccgtg
gtaggccagccccgcggcgtgccgatgcccgccttgcacacggcgcaggcgcagccgcaa
caacacaacttgcaacaaatcgctcagacggtgcaactctctcagccggtgcagcaggcc
ccggcgccgatccccgcgccccaacaacaacaacaacaacaacaacagcagcagcaacaa
cagcaacaacaacagcccttgttgccaaggaggggactctcgctaacgcgcgatcaaatg
cttgaagcccaggacatgtttaggaacgcgaaccgcgtcacgaggccggagaaagccctc
atacttggcttcatggctgggtctagagacaacccctgtccgaacctaggcaacatagtg
acaataaaactatcagaaaacatagagaatgtactgcaatccgacgacacataccttact
atgctgtcagagatgcactttcaaatgaactacaacaacggacaatggacgagactgaag
aaataccgacacatagacggcatggtgcctcagaagatacccccgggctccactgtcata
ccggcaaacagccagcagccggtcgtctctatagccaatcagagtgttagttaa

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