Amyelois transitella (navel orangeworm): 106131013
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Entry
106131013 CDS
T09957
Name
(RefSeq) breast cancer type 2 susceptibility protein homolog
KO
K08775
breast cancer 2 susceptibility protein
Organism
atra
Amyelois transitella (navel orangeworm)
Pathway
atra03440
Homologous recombination
atra03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106131013
03460 Fanconi anemia pathway
106131013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atra04121
]
106131013
03036 Chromosome and associated proteins [BR:
atra03036
]
106131013
03400 DNA repair and recombination proteins [BR:
atra03400
]
106131013
Ubiquitin system [BR:
atra04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
106131013
Chromosome and associated proteins [BR:
atra03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
106131013
DNA repair and recombination proteins [BR:
atra03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
106131013
FA (Fanconi anemia) pathway
Downstream FA components
106131013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA2
BRCA-2_OB1
BRCA-2_OB3
BRCA-2_helical
BRCA2DBD_OB2
Motif
Other DBs
NCBI-GeneID:
106131013
NCBI-ProteinID:
XP_060808938
LinkDB
All DBs
Position
30:complement(join(2878601..2879681,2879967..2880063,2880427..2880601,2881500..2881604,2881826..2881935,2882162..2882369,2887140..2887311,2887826..2891820,2892743..2893018))
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AA seq
2072 aa
AA seq
DB search
MDNNSDSLKNFEEILMQQSTKKADIYQTSKKDNAQDFQSQIEYNPRDIIRDISAQIKAIH
NADCLIRKKCVNQVLAKHKTSGFVPINELQAVVPSKKTSKFETQFVLDTQLINVIEDVEA
MNSRKGIITQEFEKSFYNSNLESKLKTPGNTTADCAKDKDQDDYSTDVKFTENKGEINKD
EMRKDFCLSDVSPTKDVKICMDDNCTALLDQCVEVEHNIDVQDFITVTDINSSPVINLNN
GNKSKSMSPLVYNLESFEKFEKLAHPIIEESDDIETAKNLINSQILGKELLLQSNFEPEF
KTREPSLSPVLRISKTPKVSSDKLDAVRQSSSHFKIKMLPDVTDINSKDIDDKQESGPTS
LSILDVITDSKEESKRKSFNFEDEILFSSDEELDNKETSLKELPFTCALETSFYDHSNVL
DTTVYVGFQTASNKSIQVSAVSFNRAKSILDDETDGTKTPTLKELVESCDMIPKTNKSVL
NYNQIKVKQDDSPKTADTHFIGFKTANGKAINILDKNIDKAKSIFKDIDDTSKQILQNGN
KLNGFKTASNKNIYLSEKALSSCKRVFQDIDLDINFDEDNLLPKNEPCSKRIRHSLDKES
STSNVAVNLIEKESIDTNNIKIDEDILLEFEDDLTFNENLGKESKAVDSEAETTLEKNMS
NNCVVSNRRKLDQNDFSSNINVGFKTASNKNITISEQALTRTKNVFQEFDVFNIDTISDC
YLRDNAKCDNMEDNVVPTTSVVGFKTASNKEIIISEDAIAKSKNIFQDIEILGDCKTSDM
ESIVDMNENKNINEPSTSKESGFRTANNNKMTISASALAKTKHIFKDLDENVDENKLIQE
KNLNKMLDVALRNPNIQEGKFNGFKTASNRKIQISDDALAKTKKIFEDINDEKYKSVNLG
FQTASKKPVQISAQALARSKKIFEDLDKVEEPNNFEKVVANPVFKGFQTASKKEVKISAD
ALARSKKLFENLEKNNRTNVLNKDGSAIHFQNHSEKDFQGFQTASNKEIKVSAQALAKSR
DLFKDIEKGDTTFKTKPLSQEGDKNEKILPVFTGFQTASKKEVKISPEGLENSRKIFRDL
SEFKEKEINISNDTIKCFNNFKGFQTASNKKVVISEDALKLGRRILNDANANNNKSGFSK
PSFSFKTANNDNVEISEEALIKSKEFFNDDHETDKIPNSSILKTYNLNFNEPKFDNIDKL
IDTQVIKNFEETLNTEDFRSPENKCKRSGSPILSCPKAKKRKFATPYKKDNSENIKQPLI
KQIDVCDDGYKKNKKYTLKDIMAMENSNTDKEMTTDITVNDIKIDEFEFVGARNDISNSI
ISQDDLKHHFLKSVNKTLVPDGWFENHVKLILWKLLSYEVKFPRSMYGVCTAKNVLAQLK
YRYFKELYNAERPALRKILERDDVASKTLVLCVRDIYNDGAEKSDTNQTELLLTDGWYNI
RTCIDKMLVKYVNNGKIKIGTKLVTNGAELVNCEQGVAPWEDISSVRLKIPGNSTRRARW
DARLGYHANAAILSHLTAVTPDGGKISKLRVLVARVYPPLYVEKFEDGSTVTRSERLEHI
HQMKYESERQALVEKIYEEVEKEMSDEDSPESEDQDIDKRSLDSGSQIARLLKMSKEPSQ
FRASLTDSQRRLLEVYTASKRDKMLQNIQDKVFSRMSAARSVVPLLRVRVTDVFQGDVNR
ALLTIWKPNDAISELITEGACVDILNVVPTAVRYSELQLSAGRQTIFKQTDPKNRDKLLP
YVKSISRTCYPIKEIITHPTMVTDYNEIDTAGIIIEIDPSHNAFKSISQFQNVYLTDEYK
NIICVNFWGGIKKFGFENVLDTGQVVACVNLQKRVGNTRKNIPQYRATEYTYFTKTPKSV
AARKIVEDLWKVLKNKSFVQECLVVKNRLFKCNFSNENISPYRFQNHDLSKNKVYIESPL
ARSNKITDEFNLSGLDFESTFRQTEPQELSPKALLRKKRVYEKISKLKMYGEPPPLSPIN
IINKSKNATKSFKSPLLNSNVTSNCDTPVANAKTLPENMGNKLSCSPVLALHRTLRKSVN
PVKLDFSSVANDENDVDHFAEEFDASPPLSLD
NT seq
6219 nt
NT seq
+upstream
nt +downstream
nt
atggataataactctgattcactaaaaaatttcgaagaaatattaatgcagcaaagtact
aagaaggcagacatttatcaaaccagcaagaaagataatgcacaagatttccaaagtcaa
attgagtataatcctagagacatcatccgtgatatatcagctcaaataaaagctattcat
aatgcagactgtttgattagaaagaaatgtgttaatcaagtgttggctaaacacaaaact
tctggttttgtacccataaatgaattgcaagctgtggtaccatctaagaaaacatctaaa
tttgaaacacaatttgtgctagatacacaattaatcaatgttatagaagatgttgaagcc
atgaattcgcgtaaaggtattattacccaagaatttgaaaaatctttctataattcaaat
ttagaaagtaaacttaaaactcctggtaatactacagccgattgtgcaaaagataaagac
caagacgattattctacagatgtgaaatttactgaaaataaaggtgaaattaataaagat
gagatgagaaaagatttttgtttatcagatgtcagtccaacaaaagatgtaaaaatatgt
atggatgataattgcactgcactattggatcagtgtgtagaggtggaacataatattgat
gtacaagattttataacagttacagatataaattccagccctgttataaatttaaataat
ggcaataaatctaaaagtatgtctcctttagtgtataatttagagtcttttgaaaagttt
gagaagttagctcatcctattattgaagaaagtgatgatatagaaacagctaaaaatctt
attaattcccagatattaggcaaagaattgttattgcaatcaaattttgaaccagaattt
aaaaccagagagccatcacttagcccagtacttagaatatccaaaactccgaaagtaagt
tctgataaacttgatgcagtaagacaaagttcatcacattttaaaataaaaatgttgcca
gatgtaactgacattaatagcaaagatattgatgacaagcaagaaagtgggcctacatca
ttgtctattttagatgttattactgattcgaaggaagaaagtaaaaggaaatcattcaat
tttgaagacgaaattttgttcagtagtgacgaagaacttgacaataaggaaacaagtcta
aaagaattaccgtttacatgtgccttagaaacttccttttatgatcactctaatgtttta
gacacaactgtgtatgtgggttttcagacagctagtaacaaatctattcaggtatccgct
gtttcttttaaccgagctaaaagtattttagatgatgaaacagatggtaccaagactcct
actttaaaagagttagtagaaagttgtgatatgattcctaaaactaataagagcgttctg
aattataatcaaataaaagtaaaacaagatgacagtcctaaaaccgctgatacccacttt
attggatttaaaactgccaatggaaaagcaataaacatattggataaaaatatagataag
gctaaatctatatttaaagatattgatgacactagtaaacaaatattacaaaatggtaac
aaactcaatggttttaaaaccgcaagtaacaaaaacatttatttgtccgaaaaagcatta
tcaagttgcaaaagagtatttcaagatatagatttagatatcaactttgacgaagacaat
ttgctgccaaaaaatgaaccttgctctaagagaataagacatagtttagataaggaaagt
agtacaagtaatgttgctgtgaatttgattgaaaaagaaagtatagatacaaataatatt
aaaatagacgaagatattttattggaatttgaagatgatttaacttttaacgagaattta
ggcaaagagagcaaagctgttgatagtgaggcggaaactactctagaaaaaaatatgagc
aacaattgtgttgtatctaatagaagaaaattagatcaaaatgatttttcatcaaatatc
aacgttggttttaaaactgcaagcaataaaaatataaccatatctgaacaagctcttaca
agaacaaaaaatgtatttcaagagtttgatgtttttaatatagataccataagtgattgt
tacttaagggataacgccaaatgtgataatatggaagataatgtagtacctactactagt
gttgtaggatttaaaacagccagtaataaagaaataataatttctgaagatgctatcgcg
aaatctaaaaatatttttcaagatattgaaattttgggagattgtaaaacaagtgacatg
gaaagtattgttgatatgaatgaaaataaaaatattaatgaaccatcgacaagcaaggaa
tctggttttagaacagctaataataataagatgacaatatctgcatcagcattggcaaaa
accaaacatatttttaaagatttagatgaaaacgttgatgagaacaaactgatacaagag
aaaaacttaaacaagatgttagatgttgctttacggaatccaaatatacaagaaggcaaa
tttaatggatttaaaacagctagtaatagaaaaatacaaatatcagatgatgctttagca
aaaactaagaaaatatttgaagatataaatgatgaaaaatataaaagtgtaaatcttggt
tttcaaacagctagcaagaaaccagttcaaatatctgctcaagcattagcaagaagcaaa
aagattttcgaagatttggacaaagttgaagaaccaaacaattttgaaaaggttgttgcg
aaccctgtttttaaaggatttcagactgctagcaaaaaagaagtgaaaatctccgctgac
gctttggccagaagtaaaaagttatttgaaaatttggaaaaaaataatagaaccaatgtt
ttaaataaagatggcagcgccattcattttcagaatcattctgaaaaagatttccaaggt
tttcaaacagcaagcaataaagaaattaaagtttctgctcaagcgttagctaaaagtaga
gatctatttaaagatatagaaaaaggtgataccacgttcaagacaaaaccactctcgcaa
gaaggtgataaaaatgaaaaaatattacctgtatttacaggattccaaacagccagtaaa
aaagaggtgaaaatttctcctgaaggtttagaaaatagtagaaaaatatttcgagattta
agcgaatttaaagaaaaagaaattaatatttccaatgatactataaaatgctttaataat
ttcaaaggttttcaaactgcaagtaataaaaaagttgttatttctgaagacgcgttgaaa
ttaggaagacggatacttaacgatgcaaatgctaataacaataaaagtggtttttctaaa
ccatcatttagtttcaaaactgctaataatgacaatgtcgagatatctgaagaagctctg
ataaaatctaaagaatttttcaatgacgatcatgagacagataaaatacctaattcaagt
attttaaaaacatataatttaaatttcaatgaaccaaagtttgacaatatagataaactt
atagatacacaagtaattaagaattttgaagaaacattgaacacagaagattttagatca
ccagaaaacaaatgtaaaagatcaggcagcccgatactctcttgtcctaaagcaaagaag
agaaaatttgcgacaccatacaaaaaagataattccgaaaatattaaacaacctttgatc
aaacaaattgacgtatgtgatgatggttataagaaaaacaaaaaatatacacttaaagat
ataatggcaatggaaaatagcaatactgataaagaaatgactacagatataactgtaaat
gacataaaaatagacgaattcgagtttgttggtgcaagaaatgatatatctaattcaata
atatcacaagatgacctcaaacatcattttttaaagtcagtcaataaaactttagttccc
gatggatggtttgaaaaccacgttaaattaattttatggaaattgcttagttacgaagtt
aaatttcctagatcgatgtatggggtgtgtacagcgaaaaatgtattggcccaactcaaa
tatagatatttcaaagagttgtacaatgctgagaggcccgctttgaggaaaatactcgaa
agagatgacgtggcttcaaaaactttggttttatgtgtcagagatatttataatgatggc
gcagaaaaaagtgataccaaccaaacggagttacttctcacagacggttggtacaacata
aggacgtgtatagacaagatgctagttaaatatgttaacaatggcaaaattaaaattggc
actaaacttgttactaatggcgctgagctggtgaactgtgagcaaggggtggcgccttgg
gaggatatatcatcggttcgcctcaaaatacccggtaactcgacccggcgcgcccgctgg
gacgcccgcctcggttaccatgccaacgccgccatcttgtctcatctgacagctgtcacg
ccagatggcgggaaaatatcgaagctaagagttttggtcgcgagagtgtacccaccgctt
tacgttgagaagtttgaggatggaagcaccgtgacaagatcagaacgtcttgaacacatt
caccagatgaagtacgaatctgagagacaagcgctcgtggagaagatatacgaggaagtg
gagaaggaaatgtccgacgaggattcacctgaatccgaagaccaagacatcgacaaacgg
tcattggacagcgggtctcaaatagcgagactgttgaaaatgagcaaagagccttcgcaa
tttagggcaagtctgacagactcccaaaggcgtcttctagaagtctacacggcatcgaaa
cgggacaaaatgctccagaatatccaggataaggtctttagcaggatgtctgccgccagg
agtgtggtgcctctgctcagggtgagagtcactgatgtgttccagggcgatgtgaacaga
gcccttttaacaatatggaaaccgaacgacgcgatatcggaactcatcacagagggcgct
tgtgtcgatattctcaatgtcgttcccaccgctgttaggtattcagagctccaactatcc
gccggccggcagacaattttcaagcaaaccgacccaaaaaatcgagacaaattattacca
tacgtaaaatctataagcagaacttgctaccccatcaaagaaataataacacaccccacc
atggtcaccgattacaatgaaatcgatacggcaggcatcataatcgaaatcgatccgtcg
cataatgctttcaaatcgatttcgcaattccaaaacgtctacttgacagatgaatataag
aatataatctgtgtcaacttttggggtggcataaagaaatttggcttcgaaaacgtattg
gatacaggacaagtggtcgcgtgtgttaatttgcaaaagagagttggcaacacccgcaaa
aatatacctcagtatcgcgcgaccgagtacacgtatttcacgaaaactcccaaaagtgtt
gccgctcgaaaaattgttgaggatctatggaaagttttaaagaataaaagttttgtgcaa
gaatgtttagttgttaagaatagattgtttaaatgtaacttttctaacgaaaatatttct
ccgtataggtttcagaatcacgatttgtcgaaaaataaagtttatatagagtctccttta
gctagatctaacaaaatcacagacgaatttaatttatccggtcttgatttcgagtctaca
ttcaggcaaacagaaccacaagaattatcaccgaaggcattgttaagaaaaaagagagtg
tacgaaaaaatatctaaattaaaaatgtacggtgaaccaccacctttaagtcctataaat
ataataaacaaatcaaaaaacgctacgaaatctttcaaaagtccccttttaaactcaaat
gttaccagtaattgtgatactccagttgccaacgcaaaaactttacccgaaaatatggga
aataaattaagttgcagtccagtgttggcattacatagaacgttaagaaaaagtgttaat
cctgtgaaattggatttcagtagtgttgccaatgatgaaaacgatgttgatcatttcgcg
gaggagtttgatgctagtccgcctttaagtctagattga
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integrated database retrieval system
