Amyelois transitella (navel orangeworm): 106131154
Help
Entry
106131154 CDS
T09957
Name
(RefSeq) paired box protein Pax-6 isoform X1
KO
K08031
paired box protein 6
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atra03000
]
106131154
Transcription factors [BR:
atra03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
106131154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
Homeobox_KN
zf-C2H2_13
Motif
Other DBs
NCBI-GeneID:
106131154
NCBI-ProteinID:
XP_013185606
LinkDB
All DBs
Position
6:join(5509487..5509616,5521655..5521852,5534351..5534491,5546658..5546933,5547215..5547399,5547602..5548165)
Genome browser
AA seq
497 aa
AA seq
DB search
MLISAGSGPTPEFSPASCCASWKMEPAPPAPAALSQTLNLSPNVPVSPSSSGGGAGGGSG
TPLYPGAASHPLSSLLSQQRLLELSRFGLRHYDIAHHVLSQQGAVTKLLGTLRPPGLIGG
SKPKVATPAVVSKIEQYKRENPTIFAWEIRERLISEGVCTNATAPSVSSINRILRNRAAE
RAAAEFARAAGYGLYAAPPPYGAFPWAGGGGVWPPGSLSLPPGVPPSSGVPHPDAVQQGF
LSSGRGLIDVDGDDSGSLDGEQPKFRRNRTTFSPDQLEELEKEFEKSHYPCVSTRERLAS
KTSLSEARVQVWFSNRRAKWRRHQRMNLLKRGGGSPPHRLPHSPSRSRSRSISPARVPYH
TPQMGGENSAFKALSHQDTNALKALSHQAQFDSNALKALSQQTFEGGAFKPHPALENSAF
KALVPHSAAAALLAAQSIQLARGCESHSDSDEEINVHDESDDESEKQKRKARSMSASPND
RRQPASDLPLQLTKHDR
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgttgatatcggcgggcagcggccccacgcccgagttttcccccgcgtcctgctgcgcc
tcttggaaaatggagccggcgccgcctgcgcctgcagccttgtcgcaaaccctcaaccta
tcgcccaacgtacctgtatccccttcatcatccgggggcggtgccggcggcggtagcggc
acccccctctaccccggagcggcgtctcaccccctctcgtccctactgtctcagcagcgg
ctcctggagctctcccggtttggcctgaggcactacgacatcgcccatcacgtgctgtcc
cagcaaggtgctgttaccaagctgcttggtactcttcgacctcctggcctcatcggtgga
agcaagcccaaagtcgcaactccggcggtggtatccaagatagagcaatacaagagggaa
aacccgacaatcttcgcgtgggagatccgtgagcgactcatctcagaaggtgtctgcaca
aacgcaacagcaccaagtgtatcatcaatcaacaggatactaagaaatagggcggctgaa
agggcggccgcagaatttgcaagagcggcgggctacggactttacgccgcgccacctcct
tacggggctttcccctgggccggcggcggtggagtgtggcccccagggtctttgtcccta
cctccaggggtcccgccttcttcaggagtccctcatcctgatgcagtgcaacaaggattc
ttgtcttcgggacggggacttatagatgtcgacggcgatgattctggttcattagatggc
gaacaaccaaagtttagacgtaaccgtacaacctttagtcctgaccaattggaagagtta
gaaaaggaattcgaaaaatctcactatccatgtgtgtcgacacgagaaaggctcgcctcg
aaaacatctctgtcggaagcgcgagttcaggtttggttttccaacagacgagccaagtgg
agacgccatcagcgcatgaacctcctgaagcgcggtggcggctcacccccgcaccgcctc
cctcactccccctcccgatcccgttcgcgttctatatcccccgctcgcgtgccctaccac
acccctcagatgggtggcgaaaatagcgcattcaaagcactatcacaccaagacacaaat
gcactgaaagccctctcacaccaagcacaatttgacagtaacgccctgaaggctttatct
cagcagacgtttgaaggaggtgcgttcaaacctcacccggcgctagagaatagtgccttt
aaagcgctcgtaccgcattccgcagcagcagcgttattggctgcacagtctattcaatta
gcacgaggatgcgagtcacattccgactctgacgaagaaataaatgttcacgatgaaagt
gatgatgagagcgagaaacaaaagagaaaagctaggtcgatgtcggccagtccgaacgac
cgacggcagcctgccagcgatctgcctttacaactcaccaaacacgatcgctga
DBGET
integrated database retrieval system
