KEGG   Amyelois transitella (navel orangeworm): 106131293
Entry
106131293         CDS       T09957                                 
Name
(RefSeq) chromatin-remodeling complex ATPase chain Iswi isoform X2
  KO
K11654  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
atra  Amyelois transitella (navel orangeworm)
Pathway
atra03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:atra00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    106131293
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:atra03021]
    106131293
   03036 Chromosome and associated proteins [BR:atra03036]
    106131293
Transcription machinery [BR:atra03021]
 Eukaryotic type
  RNA polymerase I system
   Other transcription-related factors
    NoRC (nucleolar remodeling complex)
     106131293
Chromosome and associated proteins [BR:atra03036]
 Eukaryotic type
  Chromatin remodeling factors
   CHRAC complex
    106131293
   RSF complex
    106131293
   WICH complex
    106131293
   B-WICH complex
    106131293
   NORC complex
    106131293
   BRF complex
    106131293
   NuRF complex (fruit fly)
    106131293
SSDB
Motif
Pfam: SNF2-rel_dom SLIDE Helicase_C HAND ResIII DEAD HDA2-3 DBINO Myb_DNA-binding DUF4800
Other DBs
NCBI-GeneID: 106131293
NCBI-ProteinID: XP_013185802
LinkDB
Position
6:join(5381244..5381294,5381438..5381664,5381888..5382145,5382239..5382362,5383459..5383746,5384065..5384278,5384694..5384965,5385166..5385393,5385524..5385769,5386083..5386188,5386427..5386566,5387080..5387186,5387515..5387648,5387736..5387851,5387944..5388164,5388359..5388499,5388634..5388835)
AA seq 1024 aa
MSQTEEAMDVGDVGENSNGSSSDTTSSRGKEGDFESKIETDRSKRFEFLLKQTEIFSHFM
TNTPKSGSSPPKAKAGRPKKNKDPVESSSSAGDHRHRKTEQEEDEELLAETNLKQKTIFR
FEASPHYIKNGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHFKN
VPGPHIVIVPKSTLTNWMNEFKKWCPSLKAVCLIGDQETRNTFIRETLMPGNWDVCITSY
EMIIREKSVFKKFNWRYMVIDEAHRIKNEKSKLSELLREFKSMNRLLLTGTPLQNNLHEL
WALLNFLLPDVFNSSDDFDSWFNTNAALGDNQLVSRLHAVLRPFLLRRLKSEVEKKLKPK
KELKVYVGLSKMQREWYTKVLMKDIDVVNGAGKVEKMRLQNILMQLRKCCNHPYLFDGAE
PGPPYTTDEHLVYNCGKLVILDKLLPKLREQDSRVLIFSQMTRMLDILEDYCLWRQYKYC
RLDGQTPHEDRNRQIEEYNAEGSEKFIFMLSTRAGGLGINLTSADVVIIYDSDWNPQMDL
QAMDRAHRIGQKKQVRVFRLITDNTVEEKIVERAEVKLRLDKLVIQSGRLVDTKNQLNKD
EMLNMIRHGANHVFSSKDSAITDEDIDTILAKGESKTEELKQKLESLGESSLRAFSMDTP
GATTDSVYQFEGEDYREKQKVIPIGSWIEPPKRERKANYAVDAYFREALRVSEPKAPKAP
RPPKQPIVQDFQFFPPRLFELLDQEIYHYRKTLGYKVPRNPELGPDAAKIQREEQRKIDD
AEALSEEEVQEKEQLLTQGFTNWTKRDFNQFIKANEKYGRDDIENIAKDVEGKTPEEVME
YSAVFWERCHELQDVDRIMGQIERGEAKIQRRASIKKALDAKMARYRAPFHQLRISYGTN
KGKNYVEEEDRFLVCMLHKLGFDKENVYEELRAAVHAAPQFRFDWFLKSRTAVELQRRCN
TLITLIERENQELEEKERAEKKKKSGVANQNTPGGNAAGKGANTGKRKADNTPDTAQKHK
KKKK
NT seq 3075 nt   +upstreamnt  +downstreamnt
atgtcgcaaactgaagaagccatggatgtgggagatgtcggcgaaaactctaatggatct
tcgagcgataccacatcatcacgaggcaaagaaggtgatttcgaaagtaagattgaaact
gatcgttccaaaagatttgaattcttactcaaacaaacagagatcttttcgcatttcatg
acaaacactccaaaatcgggcagtagccctccgaaagctaaagctgggagaccgaagaaa
aataaagatcctgtggagtcctcaagttctgctggagatcaccgtcatcgcaaaacagag
caagaggaagatgaagagctcttagctgaaaccaacctcaaacagaagactatcttcaga
tttgaagcatctccccattacattaagaatggggagatgagagactaccaggttagaggc
cttaactggatgatttcactttatgagaatggtatcaacggtattttagctgatgagatg
ggtctggggaagacacttcagacaatttcattgcttggctatatgaaacattttaaaaat
gttcctggtccacatatagttattgtgccaaaatctactttaacaaattggatgaatgaa
ttcaaaaagtggtgtccatcactgaaagctgtgtgccttataggagaccaagagacaagg
aatacattcatacgcgagacactgatgcctggtaattgggatgtctgcatcacatcatat
gaaatgataataagagagaaatctgtattcaagaaattcaattggcgttacatggtcatt
gatgaggcccaccgcataaagaatgaaaagtctaaattgtcagagttgcttcgggaattc
aagagtatgaatagattgttgcttactggtactccattgcaaaacaacttgcatgaactt
tgggctttgctcaattttctgctaccagatgtgtttaacagttctgatgacttcgattct
tggtttaatacaaatgcggccctaggagacaaccaattggtctcccgcctgcatgctgtc
ctcagaccgttcttacttcggcgtctcaagtctgaagtagaaaagaagctgaaacctaaa
aaagagcttaaggtttatgtgggattaagtaagatgcaacgtgaatggtatacaaaggta
ctaatgaaggatattgatgtagtgaatggtgcgggtaaagtggagaagatgagactgcag
aatattctcatgcagctacgtaaatgttgcaaccacccgtacctgtttgatggtgccgag
ccaggcccaccttacaccacagatgaacatcttgtctacaactgcggcaaattggtcatt
ctagacaagttgctccccaaactgcgggagcaagattcccgagttttaattttctcacag
atgacaaggatgttggacatattggaggactactgtttgtggaggcaatataaatattgt
cgtttggatggccaaacacctcatgaagacagaaacagacaaatagaagaatacaatgct
gagggcagtgagaaattcatttttatgttatccacgagagctggcggtctaggtatcaat
ttgacttcggcggatgttgtcattatttatgattccgattggaatccacagatggatttg
caagctatggacagagctcatcgtattggacagaaaaaacaagtgcgagtatttagactc
atcacagataatacagttgaagaaaagattgtggagcgtgcagaagtgaagttgagattg
gataaattggtcatccagtctggacgacttgtcgacactaagaaccaactcaacaaagat
gagatgctgaatatgatcaggcatggagctaatcacgttttctcttcaaaggattctgcc
attacagatgaagatattgatactattctggctaaaggagaatcaaagacagaagaactg
aagcagaagttggaaagtcttggagaatcttcgttgcgcgctttctcaatggacacaccc
ggagctacgactgactcggtttatcaatttgaaggagaggattacagggagaagcaaaaa
gttatacctatcggtagctggatcgaaccccctaaacgtgagcgtaaagctaattatgct
gtggatgcatacttcagggaggcattgcgtgtgtctgaacctaaggctccgaaggctcca
cggccgccaaagcaaccaatagttcaagatttccagtttttcccaccacgactatttgaa
ctgttggaccaagaaatatatcattatagaaagactttaggttataaagtacctcgcaat
cctgaattgggtccagatgcagctaagatccaaagagaagagcaacgaaaaatagacgat
gcggaggctctcagcgaagaggaagttcaagaaaaggaacaacttttgacacaaggtttc
accaattggacaaagagagattttaatcagtttataaaagcaaatgagaaatacggcaga
gacgacatcgaaaatattgctaaagatgtcgagggaaaaacaccagaagaggttatggag
tattcagctgtattttgggaaagatgtcatgaactccaagacgtcgacaggataatgggc
cagattgagaggggtgaggcaaaaatacaaagaagagcttcgatcaaaaaggcattggat
gctaaaatggctcgttatagggcaccgttccatcaactaagaatatcgtatggcacaaat
aaagggaaaaattatgttgaagaagaggatagattcctggtatgtatgcttcataagctg
ggtttcgacaaagagaatgtgtatgaagagcttcgggcggcagtacatgcggcgccgcag
ttccgcttcgattggttcctcaagtcgaggactgcggtcgagctacagcgcagatgtaat
acgcttatcacgttaatcgaaagagaaaatcaagagttggaggagaaagaacgagcagaa
aagaagaaaaagagtggagtcgctaatcaaaacacgccaggagggaatgcggctggcaaa
ggcgccaacaccgggaaacgcaaagcggacaatactccagacaccgcacagaaacataag
aaaaagaagaagtag

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