Amyelois transitella (navel orangeworm): 106131392
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Entry
106131392 CDS
T09957
Name
(RefSeq) caprin homolog
KO
K18743
caprin-1
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atra03019
]
106131392
Messenger RNA biogenesis [BR:
atra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
106131392
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Gene cluster
GFIT
Motif
Pfam:
Caprin-1_dimer
RUN
Speriolin_C
Motif
Other DBs
NCBI-GeneID:
106131392
NCBI-ProteinID:
XP_013185957
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All DBs
Position
6:complement(join(7395829..7397167,7397683..7397849,7399867..7400049,7400792..7400914))
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AA seq
603 aa
AA seq
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MPSAANAKSEKPASSEAMDNSPVRQIMTVIEHKIRNLEKRKSKLTSYRDLQKAGKELNSD
QRVAVAKYDEVAQTLEFARDLSNQIKSIATAAEREAKKQAKKDAWVRSASETNKIREVLL
ILDCLTQMGSNEAREDFLSGTNGAAKLSAEDLKILDDLYPEVTPKHEVNEEGQPGFFSHV
TKAAEHLYSVIDGKPKEVLGTTYTRIKEIVTTIHECGYFDKTLEVVNQVIEENCVPLAEE
PQDVVENDVEGEPVTPYPPAGPAGPLPVPPAPAVVPAPAYPLRPLPPITLQEVEHAYFSQ
QYPQQRPLAEVIGSQNFYFLQESEIDSPVGTPQPPPLAGQPSPPAPIPSQTFTNQHYVLP
GQRVPDVAPMPLPPQPHFPPHPELPAFAPPGVPLAAPLPHVPPHAAPLAAPPAAQPPQSP
PQPAEPRPASPPPETNHDDDWKETRSPERDDAADRKSQGQGDGQNRFRRYGRGGSRGAPN
GHRGRGMFASRQSGDGYRGRHGDYQNRSNKDGYQNRQYDGYQNRHGKDGYHNRGGDDAYY
GNGDAHDSHQQNENGTRDRYNDNNQSYQGGFKSRGRGGPRGGARGASRPPRPQQYNRKPE
NVE
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgccttcagctgcgaatgcaaaatctgaaaaaccagcctcttcggaggctatggataat
tctcctgtacgacaaatcatgacggttattgaacacaaaatccgcaatttggagaaaaga
aagagcaagttgacatcatatcgtgatttgcaaaaagctggaaaagagcttaattcagat
caaagagtagcagttgcaaaatatgatgaggttgctcaaacactggaatttgcaagagat
ttgtctaaccaaatcaagtcgattgccacggctgctgaaagagaagcaaaaaaacaagct
aaaaaggatgcatgggttcgttctgcatctgaaacaaataagatccgggaggtacttctt
atactagattgtcttacccaaatgggcagtaatgaagcccgtgaagattttctcagtggc
accaacggtgctgctaaactgtctgcagaggacttgaaaatattggatgatttatatcct
gaagttactcctaaacatgaagttaatgaagagggtcaaccaggattttttagtcatgtt
acaaaggctgctgaacatctatactctgtaattgatggcaagccaaaagaagtcttggga
acaacctacacacgaatcaaagaaattgttactactattcatgaatgtggctactttgac
aagacactggaggtggtcaaccaagtgattgaagaaaactgtgttcccttagcagaggaa
cctcaagatgtcgtagaaaatgatgtagaaggagaaccggtcactccgtacccgcccgcg
ggcccggcggggccgctgcccgtgccgcccgcgcccgccgtcgtgcccgcgcccgcctac
cctctgcgccccctgccgcccatcacactacaggaggtggaacacgcgtacttctcacaa
cagtatcctcaacagagaccactagctgaagtcataggttctcagaatttctactttctc
caagagtccgagatcgacagccccgtcgggacgccgcaacccccgccgctcgccggccaa
ccgtcgccgccggcgcccattccgagccagaccttcacgaaccagcattacgtgctgccc
ggccagcgcgtgcccgacgtggcgcccatgccgctgccgccgcagccgcacttcccgccg
caccccgagctgccggccttcgcgccgcccggcgtgccgctcgccgcgccgctgccgcac
gtgccgccgcacgccgcgccgctcgccgccccgccggccgcgcagccgccgcagtcgccg
ccgcagcccgcagagccgcgcccggcctcgccgccgccggagaccaaccacgacgacgac
tggaaggagacccgcagccccgagcgagacgacgccgccgatcgcaaatcgcaaggccaa
ggggacggccagaatagattcagacgctacggccgaggcggcagtaggggcgcgcctaat
ggacaccgaggtcgcggaatgttcgcgagccggcagagcggcgacgggtaccgcggcagg
catggagactatcagaaccggtccaacaaggacggctatcagaacagacagtatgatggc
taccagaatagacacggaaaggatggatatcacaaccgaggcggtgacgatgcttactac
ggcaacggtgacgcgcacgactctcatcaacagaacgagaacggcactcgcgacagatac
aatgacaacaaccaaagctaccagggcgggttcaagagccgcggccgaggtgggcctcgc
ggcggcgctcgcggcgcttcgcggcctcctcgcccgcagcaatacaatcgtaaaccagaa
aacgttgaatag
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