Amyelois transitella (navel orangeworm): 106131443
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Entry
106131443 CDS
T09957
Name
(RefSeq) neuronal synaptobrevin-like
KO
K13504
vesicle-associated membrane protein 2
Organism
atra
Amyelois transitella (navel orangeworm)
Pathway
atra04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
106131443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atra04131
]
106131443
Membrane trafficking [BR:
atra04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
VAMP
106131443
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
106131443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Synaptobrevin
MCU
DUF4199
SpoIIM
DUF4854
EMC3_TMCO1
Ribosomal_L27e
Med9
TorS_sensor_domain
Fzo_mitofusin
XhlA
Phage_Mu_Gam
GP41
Motif
Other DBs
NCBI-GeneID:
106131443
NCBI-ProteinID:
XP_060806126
LinkDB
All DBs
Position
20:join(6554738..6554772,6555280..6555424,6555799..6555877,6556444..6556523,6557117..6557168,6558085..6558168,6566637..6566695)
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AA seq
177 aa
AA seq
DB search
MPNGYRAVMPFMAAPEEGTPGLTVDEPQTGEDGEIIGGPRTPQQIAAQKRLQQTRAQVDE
VVDIMKTNVEKVLDRDAKLSELDDRADALQQGASQFEQQAKSLKNKFWLQNLKMMIIMGV
IGIVIIGLLFVRYRGTSTISGVAAPMVTNSTLPAISNHFPVASSSGEEHEVHLFLHG
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgccaaatggctacagggctgtaatgccatttatggctgcacccgaagaaggaacccca
ggtttgactgtggacgagccccagaccggcgaggatggagagatcatcggaggacctcgc
actcctcagcaaatcgcggcccagaagagactgcaacaaaccagggcgcaagtcgatgag
gtcgtggatataatgaaaacaaacgtcgaaaaagtgcttgacagggatgcaaaattatcg
gaattagacgacagagcagatgccttacaacaaggagcatcacagtttgagcagcaagcg
aagagtctaaagaacaaattctggctacaaaatctaaaaatgatgataataatgggtgtg
attggaatcgtcattatagggctactgtttgttcgttatcgcggcacgtcgaccatcagt
ggtgtggctgcacccatggtcaccaatagtaccctccccgctatttccaaccatttccca
gttgcgtcctcgtctggagaggaacatgaggttcacctgttcctgcacgggtga
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