Amyelois transitella (navel orangeworm): 106131481
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Entry
106131481 CDS
T09957
Name
(RefSeq) CCR4-NOT transcription complex subunit 9
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
atra
Amyelois transitella (navel orangeworm)
Pathway
atra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106131481
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atra03019
]
106131481
Messenger RNA biogenesis [BR:
atra03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
106131481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
106131481
NCBI-ProteinID:
XP_013186047
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All DBs
Position
20:6863278..6864231
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AA seq
317 aa
AA seq
DB search
MCIVSLSRKYFNLSKNYDTSMNTMSAQQSPANMQAAVDREKIYTWIVELCNPETRENALL
ELSKKREVVPDLAPMLWHSFGTIAALLQEITNIYVAMIPPTLTAHQSNRVCNALALMQCV
ASHPETRSAFLQAHVPLFLYPFLHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLT
TEIIPLCLRIMENGSELSKTVATFILQKILLDDSGLCYICQTYDRFSHVAMILGKMVLSL
AKDPSARLLKHVVRCYLRLSDNPRAREALRQCLPDQLRDATFTACLQEDNSTKHWLAQLI
KNLEAQPPPASPAQPNM
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgtgtatagtaagtttatcaagaaaatatttcaatttatccaaaaattacgatacttca
atgaatactatgagtgcacaacagagcccggcgaatatgcaggccgccgtggacagggag
aagatttacacgtggatcgtggagctgtgcaatccagagactcgagagaacgcgcttttg
gagttgagcaagaagcgtgaagtggtacccgatttagcgcccatgctctggcatagtttt
ggtactattgctgctcttttgcaagaaattaccaacatctatgtagctatgataccgccg
accctgacggcacaccaaagcaaccgagtatgtaatgcgctggcattaatgcaatgtgtg
gcgtctcatcctgaaacaagatctgcattcctccaagcacatgtccctttgttcctgtat
ccctttctccatactgtatccaaaacacgcccatttgaatatttgagattaacaagcctt
ggagtcattggtgctctagttaaaacagatgagcaagaggtaataacatttttgttgact
acagaaattattccactatgcctacgcatcatggagaacggatctgagttgtccaaaact
gtagctacattcattctgcagaagatattgttggacgacagcggtctgtgttatatttgt
cagacttatgacaggttttcgcatgttgctatgattcttggtaaaatggtgttatctctt
gctaaagatccatctgctcgtctcttaaaacacgtagtaaggtgctatcttcggctgtct
gacaatccaagagctcgagaggcactgcggcaatgtctcccggaccaattgagagatgcc
accttcacagcgtgtctccaagaggacaactcgactaagcactggcttgcccagcttata
aagaatttagaagctcaaccaccaccagccagccctgctcagccaaatatgtga
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