| Entry |
|
| Name |
(RefSeq) PAS domain-containing protein cky-1 isoform X1
|
| KO |
| K26457 | neuronal PAS domain-containing protein 4 |
|
| Organism |
atra Amyelois transitella (navel orangeworm)
|
| Brite |
KEGG Orthology (KO) [BR:atra00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:atra03000]
106131499
Transcription factors [BR:atra03000]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
106131499
|
| SSDB |
|
| Motif |
|
| Other DBs |
|
| LinkDB |
|
| Position |
20:complement(join(6516242..6516432,6516911..6517056,6518489..6518791,6519348..6519498,6520300..6520406,6521786..6521970,6522274..6522462,6522875..6522964,6523035..6523102,6523883..6524064,6531104..6531114))
|
| AA seq |
540 aa
MFLRFEPTKSTKGASKLRRDLINAEISNLRDLLPLPPSTRQRLSQLQLMALVCVYVRKMN
YFQQVFKSHDFSYQEQATPTPNIGFSKAMNGFMMMMTQNGKLLYISENAAEYLGHSMEDL
LIHGDSVYDIIDRQDHQTVQMELNRGENGETENEPKNRHFFCRMNVSRNARRQMRFGDQK
VVLVRGHYVSYLPLCSRNEPVFVAACAPLAMPETRECVVLGATNVFTTVHAMDMKILHID
ANGEWYLGWKKHELTDVSWYQLLHWDSLREAQSKHRLITQSEQDKCCILLVKIQQRSGQF
LWVHLVLQVKDAADSPRQFIVGTNQILTEDEASIMLANSWLYQYYGYQNQPCGMIDPRCQ
KFFRREPYQEPYQEPYYIENQELEYPGYHVSAYVQPKIAEEFACERVYSDRGPVDYSTHS
PQSTISEERSPHHYDAPPEVVVNSNMYMYPHPAKREYYEQYPRVPYMQGACTSTAIEATE
YPSPKRMRVAPPSLTLEDDGMDRWNPSPPWSDTTLKLPDYGQRFSYNHMMMPPTERAMVT |
| NT seq |
1623 nt +upstreamnt +downstreamnt
atgtttttgagattcgaacccacaaaatccacaaaaggtgccagcaagctacgacgggac
ctcatcaatgctgaaatctcgaacctccgagatctcctcccactacccccctccactcgc
cagagactgtcacagctacaattaatggcattagtctgtgtctatgtgagaaagatgaac
tatttccaacaagtgttcaagagtcacgacttcagctatcaagaacaagcgactcccaca
cctaatattggattttcaaaggcaatgaacgggtttatgatgatgatgacacagaatggg
aaactgctgtacatttcggaaaacgccgcggaatatttaggacactctatggaggatcta
cttatacacggcgatagtgtttacgacatcatagatagacaagaccaccagacagtgcag
atggagctgaacagaggggaaaacggagagactgaaaacgaaccaaagaataggcatttc
ttctgtagaatgaacgtttcgagaaacgctaggagacagatgagattcggcgaccaaaaa
gtagttcttgtaagaggtcactacgtgtcatacctcccgctgtgcagccgcaacgagccg
gtgttcgtggctgcgtgcgcgccgctcgccatgcccgagacgcgcgagtgcgtggtgctc
ggcgccaccaacgtgttcaccaccgtgcacgccatggacatgaagatactgcacatcgac
gctaatggcgagtggtacttaggctggaagaaacatgaactaacagatgtctcgtggtat
caactactgcattgggatagtttgcgagaggcacagagcaaacatcgactaataacgcaa
tcagagcaggacaagtgctgtattctcttagtgaagattcaacaacgtagtggacagttc
ctgtgggtgcatttagttttgcaagtgaaggacgcagctgattcgcccaggcaattcata
gtgggcactaaccagatattaacagaagacgaagcttcaatcatgctggcgaactcctgg
ctgtaccaatactatggttaccagaaccagccctgcggcatgatagaccctcgctgccag
aagttcttccgacgggaaccctaccaggaaccttaccaagaaccctactacatcgagaac
caggaactagagtacccagggtatcatgtgtcggcgtatgtgcagccgaagatcgctgaa
gagtttgcgtgtgaaagggtgtattcagacagagggcccgtcgattattctacacattcg
cctcagtctactattagtgaagaaagatctccccaccactacgatgctccaccggaagtg
gtagtcaatagcaatatgtacatgtacccacatcctgccaagagagagtactatgaacag
taccccagggtgccttacatgcaaggagcttgcaccagcacggctatagaagccacggag
tacccaagcccgaagcggatgcgggtagctccaccttctctgaccctggaggacgacggc
atggaccggtggaaccccagccctccctggtcagacaccaccctcaaactaccagactac
ggacagagattctcctacaaccatatgatgatgccgcccaccgagagggctatggtcact
taa |