Amyelois transitella (navel orangeworm): 106131506
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Entry
106131506 CDS
T09957
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atra04121
]
106131506
Enzymes [BR:
atra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106131506
Ubiquitin system [BR:
atra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106131506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_11
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-RING-like
zf-RING_Vps41
zf_RING_Vps8_fungal
zf_RING_Vps8
zf-Nse
zf-C3HC4_4
zf-RING_16
zf-UDP
Elicitin
PHD
Tropomyosin
DUF724
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
106131506
NCBI-ProteinID:
XP_013186073
LinkDB
All DBs
Position
20:complement(join(8087319..8087473,8088130..8088298,8089309..8089431,8091274..8091505,8091864..8091977,8092288..8092389,8092678..8092836,8093848..8094060,8094437..8094549))
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AA seq
459 aa
AA seq
DB search
MHILCTICSDLVNPAENLHATKCGHLFHYRCLSQWIERSASCPQCRNKVTDRCMFRVYPT
VSNENSGDDVTTLQSKLDDALLQLRQQKVKEKEKEDKLAEIGADLKKNVELLKTYEKKLV
SRDSAVVALREQLEYIKLQNKETKRIKDENTSLKKNLQTLNGLQKVLNATSDEVEQMLQG
YTDVRTVATFATALKRALCESEARKNELRERLHSATQNCNAEISKVRSLQTKLAQLEEKL
IHAELNASELKKQYESNNKRKTEDNVIQTDMEQALESNRDEKKSPDVCKDHPKRQSEFNK
AMYVSHSDKSFDRMVKTIEDSDSPYLCLKQSSLALTVLQQRPKQMAADNKLKPSELALLN
SVRNIAMKKPAQEPSTSIFQKKPKLLSLAMEHEPNLDDAQMDITYDGLGGHSKPDIFPTP
TKRPLKSCVPKLSAKHKLKRPTPNGSQDISKMLAKMQDK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgcatattctatgcactatttgtagtgacctggtgaatccggctgaaaatttacatgct
actaaatgtggtcatctgtttcattaccgttgtctctcacaatggatcgaaagatcagca
tcatgtccccaatgccgtaacaaagtgacagaccgatgtatgttccgtgtttacccaact
gtgtcaaatgagaattctggtgatgatgttaccacacttcagtcgaagctggacgatgca
ttgttgcaattgcgacagcagaaagtaaaagagaaagaaaaagaggataagctggcagaa
atcggtgctgatttgaagaaaaatgtggaacttctaaagacgtatgagaagaagctcgtc
agccgagactcagctgtggtagctcttcgggaacaactggagtatatcaaattgcagaat
aaggaaacgaaaaggataaaagatgagaatacgtctttgaagaagaacttgcagacttta
aatggtctacagaaggtgttaaacgctacaagtgacgaagtggaacagatgttacaagga
tacacggatgtacgtactgtagccaccttcgcgacagctctcaaaagagcattatgtgaa
tctgaggcaagaaagaatgaactaagagaaagactgcactcggccactcagaactgcaac
gcggaaatatctaaagttcgctctttgcagacaaaacttgcccaactagaggagaagctt
atacatgcagagttgaacgcctccgaattgaagaaacaatatgaaagtaacaataaaagg
aaaacggaggacaacgtaattcagactgatatggagcaagccttagagtctaatcgcgat
gaaaagaaatcacctgatgtttgcaaagatcacccaaagaggcaatccgaattcaacaaa
gctatgtatgttagccatagcgataaatcatttgacagaatggtgaaaactatagaggac
tcggactcgccatatttgtgtctgaagcagagtagtttagcgttgactgtgctccagcag
cggccgaagcaaatggcggctgataataaactgaagccttcagaattggcgctattgaac
tctgttaggaatatcgcaatgaagaaaccggcgcaagaacccagcactagcatattccag
aaaaagccaaagctattatcgcttgcgatggaacacgagcctaacctcgacgatgcacag
atggatatcacatatgacggattaggaggccactcgaaaccggacatattcccgacgccc
acaaaacgcccactgaaaagctgcgtcccgaaactttcagctaagcacaaactaaagcga
cccactcctaatggcagccaggatataagcaaaatgttggctaagatgcaggataaatga
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