Amyelois transitella (navel orangeworm): 106131652
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Entry
106131652 CDS
T09957
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atra03041
]
106131652
Enzymes [BR:
atra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106131652
Spliceosome [BR:
atra03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
106131652
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
ResIII
KH_2
CMS1
MOEP19
SNF2-rel_dom
KH-I_KHDC4-BBP
P-loop_SecA
KH_PNO1_2nd
KH_DEAH11
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
106131652
NCBI-ProteinID:
XP_013186270
LinkDB
All DBs
Position
20:complement(4198054..4200021)
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AA seq
655 aa
AA seq
DB search
MADFEDEWLEHEQSQQAQAPAPITYNNTRIYRPSQNRGRGDGGHSNEGNWRARGNSAGGD
FSNTRRDFPRRDNRNKKTMFVPSKKIGRIIGKGGSKIRELESESQAKIQIGDSSGDETEL
SLFGSDEAITKVEEMLNDLLQDYKPPPKDSHNESTDSGRTNEFFKTNESGVQVIDWDKLN
SYHDQHQKARWESLPPIVKDFYKEDPEVAAMSPSSVARWRLANNDIQVKRTFDDKPGLRP
IPNPIKTFEQAFKHYPEILDEIYKQGFANPSPIQCQAWPILLRGEDLIGIAQTGTGKTLA
FLLPALIHIEGQVIPREEREGPTVLIMAPTRELALQIDKEVSKYQYRGIKSVCLYGGGDR
KEQINIVSKGVDIVIATPGRLNDLVMAKHLSIINFSYIVLDEADRMLDMGFEPQIRKSLF
DVRPDRQTVMTSATWPPGVRRLASSYMKDPIQVNVGSLDLAAVHTVTQKIIFVQEDDKEN
VLLEFIQNMDSNDKVIIFCGKKATATHISTELALKGIECQSLHGDRDQCDREEALADMMD
GNVNILVATDVASRGIDIKDLTHVINFDFPMHIEEYVHRVGRTGRAGRTGTALSFIARND
WAHAKDLIKILEEANQEVPDELESMAERFKAMKLRREKEGGGRGGRGGRGRRDRY
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggctgatttcgaggacgaatggttagaacatgaacagagtcaacaggctcaggcaccg
gcgccgatcacctacaataatactcggatttaccggccgagccaaaacagaggcagaggg
gacggaggccacagcaacgaaggtaactggagggctcgtggtaattccgctggcggcgac
ttttctaacacgaggcgggactttccaaggcgcgataacagaaacaagaaaactatgttc
gtcccatcaaaaaagattggtcgcatcattggtaaaggaggttcaaaaatacgtgagttg
gaatctgaatctcaagctaagatccagatcggcgattcaagcggcgacgagaccgaactt
agtctatttggatctgatgaagctataactaaagtagaagagatgttgaatgatcttttg
caggactataagccaccaccaaaggacagtcataatgaaagtacagatagtggtcgcact
aatgaatttttcaaaacaaatgagtctggtgtccaagttattgattgggataaactgaac
agttatcatgatcaacatcaaaaagctcgatgggaaagtttgcctcccattgttaaagat
ttctacaaagaagacccagaagtagctgccatgtcaccttcttcagtggcccgttggcga
cttgctaataatgacatacaagtaaagaggacatttgatgacaaaccaggattgaggcct
attccaaacccgataaaaactttcgaacaagcttttaaacactacccagaaatcctagat
gaaatatataaacaaggctttgcaaacccatcccctatccagtgtcaagcatggccaata
ctgctaagaggtgaggatttgattggtattgcccaaactggtacaggtaagacattagct
tttttgctgcctgctttgatacatattgaaggacaagtgattccaagagaagagagagag
ggccccactgtgttaatcatggctcctacaagggaactggcactacaaatagataaagag
gtatctaaatatcagtacagaggaatcaagtctgtttgtttgtatggagggggagacaga
aaggagcaaatcaacattgtttctaaaggagttgatattgtaatagctacccctggaaga
ctaaatgatttggtaatggccaaacatttaagtataatcaacttttcatacatagtgttg
gatgaagctgatagaatgctggatatgggatttgagccacagatcaggaaatctttgttt
gatgtgaggccggatcgacagactgtcatgacttcagcgacttggcctcctggagttcgt
cgtctggcaagttcctacatgaaagatccaatccaagtcaatgttggctctctggatttg
gcagcagtccacacagtcacgcagaaaataatatttgtacaagaagatgataaagaaaat
gtattgctagagtttattcagaatatggactccaatgacaaagttattatattctgcggc
aagaaagctacagctacacatatttctacagaattggctttgaagggcattgaatgccag
tcattgcatggagatagagatcagtgcgaccgtgaagaagcattagctgatatgatggat
ggtaatgtgaatattttggtggcaactgatgtcgcctcaagaggaatagatatcaaagat
ctaacacatgttataaacttcgattttccgatgcatattgaagaatatgtgcatagagtt
ggcaggaccggaagagctgggaggactggaacagctctgtcattcattgctaggaatgat
tgggcacatgccaaagatctgataaagatattggaggaggcaaatcaagaagttccagat
gagctagagtcgatggccgaaagattcaaggcaatgaagcttaggagggagaaagaaggt
ggaggccggggaggacgcggcggtcgcggaagacgcgacagatactag
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