KEGG   Amyelois transitella (navel orangeworm): 106131767
Entry
106131767         CDS       T09957                                 
Name
(RefSeq) CLIP-associating protein isoform X1
  KO
K16578  CLIP-associating protein 1/2
Organism
atra  Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:atra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:atra03036]
    106131767
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:atra04812]
    106131767
Chromosome and associated proteins [BR:atra03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Microtubule-associated proteins
     106131767
Cytoskeleton proteins [BR:atra04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Cytoplasmic linker proteins (CLIPs)
     CLIP-associating proteins
      106131767
SSDB
Motif
Pfam: CLASP_N XMAP215_CLASP_TOG CEP104-like_TOG HEAT_EF3_N HEAT_EZ Cnd1 HEAT TOR1L1_N Adaptin_N HEAT_2 PDS5 Sec7-like_HUS TAN
Other DBs
NCBI-GeneID: 106131767
NCBI-ProteinID: XP_060808791
LinkDB
Position
29:join(4980184..4980375,4984204..4984304,4985520..4985696,4986772..4986896,4987187..4987300,4987826..4987945,4989812..4989904,4990418..4990608,4991577..4991699,4993101..4993220,4993969..4994096,4994904..4995032,4996265..4996401,4997157..4997204,5000233..5000364,5003770..5003868,5005096..5005219,5005855..5005987,5006617..5006724,5007609..5007737,5008296..5008480,5010248..5010364,5011780..5011898,5012948..5013078,5015840..5015927,5016749..5016874,5019493..5019601,5020421..5020525,5028374..5028444,5029480..5029624,5032136..5032236,5034023..5034234,5037453..5037599,5038184..5038318,5038834..5038884)
AA seq 1454 aa
MAHYPQPASLEAALPFLTRPDLRLRQQLGEQLTALVRREPELTPDLVDQLVDALVAWLNG
GNFKVAQNGLEVLAAVAERLGHEFSNNVPTVLPHIIDRLADTKEGVRHMARVCISSLGDS
KAVPPRALLARLTPTLQHKAPHAREETVRCIQALLDTHGVAELQLRGAMPSLAALVGDPN
SAVRDAAMQLLVDVYRHVGERLRQDLKKKELVPAQKLALLEQKFDEAREAGLLLPTATQG
QSADEPDFIARSAKRTMTIPTSARSRDGDSSGASTPACEPKKTIAGLYGMPPSRKPPPPA
KPTAARNVSSAIGSTGSGGEAGAVSCEAFEAAFASTAPAAVYGARGLDDLCRHAAALLGD
RSADWEKRVDALKKIRSLLTANAHIQYPTEFAANLKDLSVPFLVVIKDLRSQVVREACIT
IAHMAKVLKNKLEQFSLYILQELINLIQNAAKVVSSAGTVCVRYIVLYVHSPRLVPVLVT
NLTTNKSKEIRSTLSEVLVLLLERWSPSAIEKQQPVVRDAIRKACVDADSNARNCARKAY
WAYKRHFPEDAEALFQRLDIGAQKQIERERHIGSVDSLHHVGSERRVITSPRSPSASVSA
ERAVGGAARSVSCVDPAAAQRARARALYSNMSRAKMAAGTASLPRAKRSPSNAGVPPSPE
RVVGRSRSRPGVSQSQPTSRSSSPSSRTSGPLSLSSARRRPSGIPRSLAGSRETSPTRSG
RSSSVVSAMRRRESAERGAVSRTPAATLRLLQQTRDAEGALRSPEDSSGCEGLRGRDDDS
EASSVCSERSLDSYRRHDGMSWSGSRGFECGSPPPPPPPDDIIALCACTHWTERKDGLTH
LANYLNSGRLLTDEQLKRLTELLNKMFVDAHTKVFSLLLDAVCELLLVHWQQLKDWLYQL
MFRLLMKLGTDILGSVQSKIMKTLDVIHECFPAELQLHNIFRFLADGATAPTGKTKVAAL
RFLADLAHDYCTPASLSAALHGGATGVAGRALAKVSVLAADPRAADVRVAARRALACLYD
CNPVPFTALMSELPPETQTLVNGVVQQHVRRTSSTGSDSPLRTVSSASNSANAEDVYSRI
RKTTTEIHSYTKQHSNAECGNHMSSKDSGISQMSDVTLSNRGHNGVPNGHYNNDAIARAA
SADSSEDANSTKESSPVPAHHRLDLPHGDYNLGRDKVKSYETDENGFIITKSGLREQEVL
DALCKLDVSQAPPEQWESLLLATHELLKYGDCRKPRECFKNIVRVALAALTIEENSGDKE
NTENAGNAQQQSSGWGTANERAAAEAVKVLIWLCRRPETRPQWLDYFDLILLKLINAYGA
LNKEVMRAVDAGMPHIAHALPAQQVLALLKPVIRTRGYPTSLCALKLASEVAKARGGELT
DETVSQLMEGVGQLADHQNSAVRKAAVFCMVAFTFALGEERMQPHLKHLSVSKYRLLQVY
ISKQREETGARAHT
NT seq 4365 nt   +upstreamnt  +downstreamnt
atggcgcattacccccaaccggcctcgctcgaggccgccctgcccttcctgaccaggcct
gacctcaggctgcggcagcaactcggcgagcaactgaccgcgctagttcgacgggagccg
gaactaacgccggacctggtcgaccaactggtcgacgcgttagtcgcgtggttgaatgga
gggaacttcaaggtggcccagaatggcctagaagtgctggcggcggtggccgagcgcctc
ggacatgagttctcaaacaacgtgccaacggttctgcctcatattattgacagactagcg
gacacaaaagagggtgtccgtcatatggcacgcgtgtgcatatcctcgcttggagacagc
aaagcggtcccgcccagggctctgctggccaggctgacgcccacgctgcagcacaaagca
ccgcacgccagggaggagacggtcaggtgtatacaggcgttacttgacacacacggcgta
gcagaactacaattacgcggcgccatgcccagcttggcggcgctggtgggcgaccccaac
agcgccgttagagatgcggcgatgcaactgttggtcgacgtgtaccgccacgtgggtgaa
agactgagacaagacttgaagaagaaggaattagtgccggcacagaagttggctctactg
gaacagaagtttgacgaggcgagagaggcaggcctattgttgcctacagcgacgcagggc
cagagcgccgatgaacctgacttcatagcgaggtcggccaaacgcaccatgaccataccc
acctccgccaggagtcgggacggagactcgtcgggggcgtccacgccagcatgtgaacca
aagaaaactatagcgggattgtacggcatgccgccgagcaggaaacctccgccgccggct
aaacccacagcggccagaaatgtatcgagcgccataggaagcacgggtagcggcggcgaa
gcaggtgcggtgtcgtgcgaagcgttcgaagcagctttcgccagcaccgcaccggccgcg
gtttacggggcgagaggtctggacgacttgtgtagacacgccgccgccttactgggtgat
agaagcgccgattgggagaagagagtggacgcgctcaaaaagatccggtctcttctaacg
gcgaatgctcacatacaataccctacagagttcgcggctaatctcaaagatttgtcagtg
cctttcttggtcgtcatcaaggatttaaggagtcaggtggtgcgcgaggcctgtattaca
atagctcatatggccaaagtcctgaagaacaaattggaacagttcagtctttacattctt
caggagctgataaatttgatacaaaacgccgccaaagtcgtatcgtcagcgggtacggta
tgcgtacggtacatagtactatatgtacattcgccaaggttggtgccggtgttggtcacc
aacctcaccaccaacaagtccaaagagatccggtctacgttgagtgaagtcctagtgcta
ctgctggagaggtggtctccttcggcgatagagaaacagcagccggtggtgagagacgca
ataagaaaggcgtgcgtggacgcagacagcaacgccaggaattgcgcgaggaaggcatac
tgggcgtacaaacgccattttccagaggacgccgaagcgttgttccagaggttggacatc
ggcgctcagaagcagatagagcgagagaggcatatcggaagcgttgatagtttacatcac
gtcggatcggaaagaagagttatcactagtcccagaagcccttcggccagtgtatcagcg
gagcgagcggtcggcggcgcggcccgctcggtgtcgtgcgtggacccggcggctgcgcag
cgcgcgcgagcgagagcgctatactccaacatgtctagggccaagatggccgccggcacg
gctagtttacctcgcgcgaaaaggtccccgagcaacgccggggtgcctcccagccctgag
agagtggtcggcaggtccagatccagaccgggggtgtcgcaatctcaacccacttcaagg
tcatcgtcaccttcctccagaaccagcggtcccttgtcgctgtccagcgccaggcggagg
ccctcgggcattcccaggtctctggccgggtccagggagaccagccccaccagaagcggt
cggtcaagcagcgtggtgtcggcaatgcggcgcagggagtcggcggagaggggcgcggtg
tcgagaacaccggcagccactctgcggctgctgcagcagaccagggacgccgagggggct
ctgagaagtcccgaagacagttcaggctgcgaaggtctccgcggcagagacgacgactct
gaagcatccagcgtttgttcagaacggagtctggactcttacaggaggcatgatggcatg
tcgtggtcgggctcgcggggcttcgagtgcggctcgccgccgccgccgccgccgcccgac
gacatcatcgcgctgtgcgcctgcacccactggacggagaggaaggacggcctcacgcac
ttggccaattatctcaacagcggtcgactcctgacagatgaacagctgaagagattgaca
gaactgctgaacaagatgtttgtcgatgcccacacgaaggtcttctcgctgctactggac
gctgtgtgcgaactgttgctggtccattggcagcagctgaaagattggctgtaccagctg
atgttcagattgttaatgaaacttggcacggacattctaggctctgtgcaaagcaagata
atgaagactctggacgtgatacacgagtgtttccctgcagaactacagcttcacaatata
ttcaggttcctggcagatggcgccaccgctcccacggggaagaccaaagtggccgcgctc
agattcctggcggatttagctcatgactactgcactccggccagtttatctgcggctttg
catggtggcgccaccggcgtggcgggcagggcgctggcgaaagtctctgtcctggccgcc
gacccgcgcgccgccgacgtcagggtggccgcaaggagggcgctggcttgcttgtacgac
tgtaaccccgtgccgttcacggcgctgatgagcgaacttccgccggaaacgcagactctc
gtcaatggtgtggtccaacagcacgtgagacgaacgtccagcaccggtagcgacagcccg
ctgcgtacagtcagcagcgccagcaactccgccaacgctgaggacgtgtactccaggata
cggaagaccacgactgagatacactcttacaccaagcagcactccaatgccgaatgcggt
aaccacatgtccagcaaagactccggcatcagccagatgtctgacgtcacgttgtccaat
agaggtcacaatggcgtgccgaacgggcattataacaatgatgcaatagcgagagccgcg
tctgcagacagctccgaggatgctaacagcaccaaagagtcttctcctgtaccggcgcat
caccgcttggacctgcctcacggggactacaatctcggccgtgacaaagttaaatcgtat
gaaacggatgagaatggatttattattactaaatccggccttcgcgaacaagaagtgttg
gacgcattgtgcaaactggacgtgtcacaggcgccccccgagcagtgggagagcctcctg
ctggccacccacgagctgctgaagtacggcgactgcaggaagcccagggagtgcttcaaa
aatatagtacgcgtggcgctagcggcgctgacaatagaagagaattccggagacaaagag
aatactgagaatgcgggcaacgctcagcagcagtcttctggttggggcacggccaacgag
cgcgccgccgccgaagctgtcaaagtcctaatatggctgtgccggagaccagagacaaga
ccacagtggctagattactttgacctcatattactgaagctgatcaacgcgtacggagct
ctaaataaggaggtcatgcgggcggtggacgcgggaatgccgcacatagcgcacgcgctg
cccgcgcaacaggtgctggcgctgctgaagccggtgatccgcacgcgcggctaccccacg
tcgctgtgcgcgctcaagctggcctcggaggtggccaaggcgcgcgggggggagctcacc
gacgagaccgtgtctcagctcatggagggagtcgggcagttggcggatcatcagaactcg
gcggttcgtaaagcggccgtattttgtatggtcgcgttcacgttcgcattgggagaggag
aggatgcagcctcacctcaaacacctctccgtcagcaagtatcggctgttacaggtgtac
atcagcaagcagcgcgaggaaactggtgcgcgcgcgcacacgtag

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