KEGG   Amyelois transitella (navel orangeworm): 106131844
Entry
106131844         CDS       T09957                                 
Name
(RefSeq) RNA-binding protein Musashi homolog Rbp6 isoform X1
  KO
K14411  RNA-binding protein Musashi
Organism
atra  Amyelois transitella (navel orangeworm)
Pathway
atra03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:atra00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    106131844
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:atra03019]
    106131844
Messenger RNA biogenesis [BR:atra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     106131844
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 RRM_11 SET1_RBD
Other DBs
NCBI-GeneID: 106131844
NCBI-ProteinID: XP_013186525
LinkDB
Position
5:join(8319220..8319278,8319351..8319391,8478001..8478082,8515604..8515688,8531637..8531678,8605779..8605871,8672165..8672213,8757266..8757348,8772275..8772359,8774199..8774231,8775069..8775149,8786416..8786481,8787835..8788055,8790380..8790421)
AA seq 353 aa
METQNQDVARSPAEVPNDPGKMFVGGLSWQTSPESLRDYFNKFGEITEVMVMKDPTTRRS
RGFGFITFGDPSSVDKVLAQGTHELDGKKIDPKVAFPRRAHPKMVTRTKKIFVGGLSAPT
TLEDVKNYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDIVDKVCEIHFHEINNKMVE
CKKAQPKEVMLPANLAKTRAAGRGAYDFMWSLGALPDGFPAAYAAYAAGRSYSGYPSFGL
PYPAVDLTNGQLTPNNNTPLLAQALSVMNNYQAAAAGFGPPASPHAAGGRAGFPAASSPG
PALDVYGSAADSVGYVQAASPQPSGFPAIAVSRAPLNYTPGPLIPAAFTNGYH
NT seq 1062 nt   +upstreamnt  +downstreamnt
atggaaacccagaatcaggacgtggcccgaagccctgctgaggtgcccaatgaccccggg
aagatgttcgtcggaggactcagctggcagactagtccagaaagcctccgagactacttt
aacaaatttggtgaaatcacagaagttatggttatgaaagatccaacaacgaggcgatcg
aggggctttggctttatcacattcggcgacccaagtagcgtagacaaagtattagctcaa
ggaacacacgaattagacggaaaaaagattgaccccaaagtggcctttcctagaagagca
catccaaagatggtgaccaggacaaagaaaatcttcgtaggagggctctcagcacccaca
acgcttgaggatgtaaaaaattacttcgaacagtttggaccgattgaagacgccatgtta
atgttcgacaaacaaaccaataggcacagaggattcggtttcgtcacatttcaaagtgaa
gacatagtagataaagtgtgcgaaatacattttcacgaaattaacaacaaaatggtggaa
tgcaaaaaagcacagcctaaagaagtcatgctcccagcgaatttggcaaagacgagagcc
gctggacgtggcgcgtacgatttcatgtggtcattgggtgcgcttcctgacggtttcccc
gcagcgtacgccgcctacgcggcaggccgtagctattcgggctatcctagcttcgggctg
ccatatccagcagttgacctgacgaacgggcaactaacaccgaacaacaacacaccgctg
ctcgcgcaagcgctgtcagtgatgaacaactaccaggcagcagcggccggcttcgggccc
ccagcgtcgccgcacgcggccggcggcagggccggattcccagcggcgagctcgccaggg
ccagcgctggacgtgtacggctctgcggcggacagcgtcggatacgtgcaagcggctagc
ccccagccctctggattcccagcgatcgcagtcagccgcgcgcctctcaattatacccca
ggacccctgattcctgcggcttttaccaacggttatcattga

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